ggKbase home page

Ig5182_scaffold_8808

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5182_scaffold_8808_1
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(3..485)
DNA (483bp) protein (161aa)
Fructose-1,6-bisphosphatase Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TA35_9EURY
fructose-1,6-bisphosphatase
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56615.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
Ig5182_scaffold_8808_2
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

596..2020
DNA (1425bp) protein (475aa)
NAD-dependent aldehyde dehydrogenase (EC:1.2.1.16)
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:AFD00837.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AFD00837.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
NAD-dependent aldehyde dehydrogenase Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I819_METCZ
Ig5182_scaffold_8808_3
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


2036..3373
DNA (1338bp) protein (446aa)
aspS2; aspartate--tRNA ligase (EC:6.1.1.12)
AspS2 protein {ECO:0000313|EMBL:AIZ56616.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AIZ56616.1};; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
Aspartyl-tRNA synthetase Tax=Euryarchaeota RepID=M9SBM8_9EURY
Ig5182_scaffold_8808_4
Candidatus Methanomethylophilus alvus, Candidatus Methanomethylophilus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

3435..3788
DNA (354bp) protein (118aa)
Holliday junction resolvase Hjc putative Tax=Euryarchaeota RepID=R7PYJ3_9EURY
putative hjc gene
Putative hjc {ECO:0000313|EMBL:AGI85732.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanomethylophilus.;" source="Candidatus Methanomethylophilus alvus Mx1201.;"
Ig5182_scaffold_8808_5

Not on your lists

3985..4635
DNA (651bp) protein (217aa)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI00037C39DC
Marine sediment metagenome DNA, contig: S06H3_C00400 {ECO:0000313|EMBL:GAH97902.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Ig5182_scaffold_8808_6
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4625..5038)
DNA (414bp) protein (138aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
Quinolinate synthase A Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VF2_METBU
quinolinate synthetase
Ig5182_scaffold_8808_7
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(5111..5527)
DNA (417bp) protein (139aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000366B0CA
quinolinate synthetase complex subunit A
Ig5182_scaffold_8808_8
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

5640..6029
DNA (390bp) protein (130aa)
mptD; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase {ECO:0000256|HAMAP-Rule:MF_02130}; Short=DHNA {ECO:0000256|HAMAP-Rule:MF_02130};; EC=4.1.2.25 {ECO:0000256|HAMAP-Rule:MF_02130};; 7,8-dihydroneopterin aldolase {ECO:0000256|HAMAP-Rule:MF_02130}; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
Dihydroneopterin aldolase Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TA71_9EURY
Ig5182_scaffold_8808_9
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

6105..6650
DNA (546bp) protein (182aa)
Nucleoside-triphosphatase Mpt1_c06930 {ECO:0000256|HAMAP-Rule:MF_00796}; Short=NTPase {ECO:0000256|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000256|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00796}; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003791710
NTPase
Ig5182_scaffold_8808_10
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

6650..7756
DNA (1107bp) protein (369aa)
trm1; tRNA (guanine(26)-N(2))-dimethyltransferase (EC:2.1.1.216)
Trm1 protein {ECO:0000313|EMBL:AIZ56579.1}; EC=2.1.1.216 {ECO:0000313|EMBL:AIZ56579.1};; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
tRNA N2,N2-dimethyl(Guanine26-N2)-methyltransferase Tax=Candidatus Methanomethylophilus alvus Mx1201 RepID=M9SBN4_9EURY
Ig5182_scaffold_8808_11
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(9156..10424)
DNA (1269bp) protein (423aa)
UbiD family decarboxylase Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YPE9_9EURY
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
UbiD protein {ECO:0000313|EMBL:AIZ56581.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
Ig5182_scaffold_8808_12
unknown

Not on your lists

comp(10497..10871)
DNA (375bp) protein (125aa)

This feature has no annotations

Ig5182_scaffold_8808_13
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11485..12333
DNA (849bp) protein (283aa)
gltX; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00016154}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00088701};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
Glutamate--tRNA ligase Tax=Candidatus Methanomethylophilus alvus Mx1201 RepID=M9SJS1_9EURY
Ig5182_scaffold_8808_14
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(12330..14246)
DNA (1917bp) protein (639aa)
Ferrous iron transport protein B Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T6A3_9EURY
ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:AGN26235.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
Ig5182_scaffold_8808_15
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(14269..14931)
DNA (663bp) protein (221aa)
Mn-dependent transcriptional regulator Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YMS5_9EURY
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:AGI47692.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon BRNA1.;"
Displaying 15 items

View Taxonomy