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Ig3397_v2_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_116_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73..333)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00038164FF
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

658..1914
DNA (1257bp) protein (419aa)
DNA-cytosine methyltransferase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
Cytosine-specific methyltransferase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6HAI7_9DELT rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2075..2224)
DNA (150bp) protein (50aa)
Mg chelatase-related protein id=1303835 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Mg chelatase-like protein; K07391 magnesium chelatase family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2611..2949
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2 id=5083605 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2980..4434
DNA (1455bp) protein (485aa)
ammonium transporter; K03320 ammonium transporter, Amt family id=5083604 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
amtB; ammonium transporter; K03320 ammonium transporter, Amt family
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4599..4856
DNA (258bp) protein (86aa)
hypothetical protein id=5083603 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4936..6069
DNA (1134bp) protein (378aa)
glcE; glycolate oxidase FAD-binding subunit; K11472 glycolate oxidase FAD binding subunit id=5083602 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glcE; glycolate oxidase FAD-binding subunit; K11472 glycolate oxidase FAD binding subunit rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6078..7307
DNA (1230bp) protein (410aa)
glcF; glycolate oxidase iron-sulfur subunit; K11473 glycolate oxidase iron-sulfur subunit id=5083601 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glcF; glycolate oxidase iron-sulfur subunit; K11473 glycolate oxidase iron-sulfur subunit rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7472..7885
DNA (414bp) protein (138aa)
hypothetical protein id=5083600 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7904..8269
DNA (366bp) protein (122aa)
LrgA family protein id=1303842 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8266..9024
DNA (759bp) protein (253aa)
putative effector of murein hydrolase id=5083598 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_12
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9025..9507)
DNA (483bp) protein (161aa)
glutathione peroxidase (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9] id=5083597 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
peroxiredoxin
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9679..10794
DNA (1116bp) protein (372aa)
response regulator receiver protein id=5083596 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
response regulator receiver protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_14
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11019..12302)
DNA (1284bp) protein (428aa)
lysophospholipid transporter LplT id=5083595 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
lysophospholipid transporter LplT rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12529..13659
DNA (1131bp) protein (377aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] id=5083594 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_16
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13808..14995
DNA (1188bp) protein (396aa)
secretion protein HlyD id=5083593 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
secretion protein HlyD rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15005..18289
DNA (3285bp) protein (1095aa)
acriflavin resistance protein id=5083592 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acriflavin resistance protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_18
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18323..18550
DNA (228bp) protein (76aa)
hypothetical protein id=5083591 bin=GWF1_Burkholderiales_GWF1_66_17 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18697..19746
DNA (1050bp) protein (350aa)
C4-dicarboxylate transporter/malic acid transport protein; K03304 tellurite resistance/dicarboxylate transporter, TDT family id=5083590 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
C4-dicarboxylate transporter/malic acid transport protein; K03304 tellurite resistance/dicarboxylate transporter, TDT family rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19759..20064
DNA (306bp) protein (102aa)
hypothetical protein id=5083589 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_21
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20379..21140
DNA (762bp) protein (254aa)
hypothetical protein; K07090 id=5083588 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein; K07090
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21184..21591)
DNA (408bp) protein (136aa)
hypothetical protein id=5083587 bin=GWF1_Burkholderiales_GWF1_66_17 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_23
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21594..21983)
DNA (390bp) protein (130aa)
hypothetical protein id=5083586 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderia graminis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22013..22693)
DNA (681bp) protein (227aa)
Putative uncharacterized protein id=1303856 bin=GWE1_Burkholderiales_65_30 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein; K06890 rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_25
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22794..23687
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=1303857 bin=GWE1_Burkholderiales_65_30 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_26
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23684..24568
DNA (885bp) protein (295aa)
hypothetical protein id=5083583 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24689..25018)
DNA (330bp) protein (110aa)
hypothetical protein; K09946 hypothetical protein id=5083582 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein; K09946 hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_28
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25270..25692
DNA (423bp) protein (141aa)
hypothetical protein id=5083581 bin=GWF1_Burkholderiales_GWF1_66_17 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25828..27021
DNA (1194bp) protein (398aa)
putative esterase id=5083580 bin=GWF1_Burkholderiales_GWF1_66_17 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
esterase, poly(3-hydroxybutyrate) depolymerase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_116_trna_1
unknown

Not on your lists

27074..27147
DNA (74bp)
transferRNA
Displaying items 1-30 of 136 in total

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