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Ig3397_v2_scaffold_283

Search features with annotation key words

Displaying items 1-30 of 310 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_283_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..269
DNA (267bp) protein (89aa)
Heme peroxidase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7SMX5_PSEME
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

487..1275
DNA (789bp) protein (263aa)
two component LuxR family transcriptional regulator id=5083834 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
two component LuxR family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1430..2611
DNA (1182bp) protein (394aa)
Periplasmic sensor signal transduction histidine kinase id=1311500 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
periplasmic sensor signal transduction histidine kinase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2763..3011)
DNA (249bp) protein (83aa)
id=5082157 bin=GWF1_Burkholderiales_GWF1_66_17 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3157..3990
DNA (834bp) protein (278aa)
hypothetical protein id=5082158 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3951..4559)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RXY9_9BURK
serin hydrolase domain-containing protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4583..5644)
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J419_PSEUL rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5708..6556)
DNA (849bp) protein (283aa)
taurine dioxygenase (EC:1.14.11.17); K03119 taurine dioxygenase [EC:1.14.11.17] rbh
Taurine dioxygenase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RXZ0_9BURK rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6589..7569)
DNA (981bp) protein (327aa)
qor3; quinone oxidoreductase Qor (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5] rbh
NADP-dependent quinone oxidoreductase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XQ23_9RALS rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7689..8729)
DNA (1041bp) protein (347aa)
AraC family transcriptional regulator n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QVH8_RALPI rbh
AraC family transcriptional regulator rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8872..9852
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RD53_CUPTR rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_12
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10034..11203
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SIA3_9BURK
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11207..12835
DNA (1629bp) protein (543aa)
AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] rbh
AMP-dependent synthetase and ligase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2U5_LEPCP rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_14
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12842..13864
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46SJ4_CUPPJ rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13870..14205
DNA (336bp) protein (112aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2U0_LEPCP
Rieske (2Fe-2S) domain-containing protein; K05710 dioxygenase ferredoxin subunit
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_16
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14232..15065)
DNA (834bp) protein (278aa)
Putative uncharacterized protein id=1268648 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15111..17456
DNA (2346bp) protein (782aa)
hypothetical protein id=5082186 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_18
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17723..20338)
DNA (2616bp) protein (872aa)
2-oxoacid dehydrogenase subunit E1; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] id=5082187 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
2-oxoacid dehydrogenase subunit E1 rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20442..20909
DNA (468bp) protein (156aa)
Transcriptional regulator, Lrp/AsnC family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XVL5_RAMTT
Lrp/AsnC family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21232..21645)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYM7_ALIDB
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_21
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22209..22622
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=1262569 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22649..23125
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZM4_9BURK rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_23
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23136..25343
DNA (2208bp) protein (736aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] id=5080007 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25324..26328
DNA (1005bp) protein (335aa)
Apbe family lipoprotein id=1262566 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
apbe family lipoprotein; K03734 thiamine biosynthesis lipoprotein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_25
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26390..26722)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Marinobacter lipolyticus RepID=UPI00037CF794
transport-associated protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_26
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26823..26990)
DNA (168bp) protein (56aa)
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27403..28095)
DNA (693bp) protein (231aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7) rbh
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY89_9BURK rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_28
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28123..28542)
DNA (420bp) protein (140aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7); K01505 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] id=5082191 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7); K01505 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28673..29146
DNA (474bp) protein (158aa)
AsnC family transcriptional regulator id=5082192 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
AsnC family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_283_30
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29153..30124)
DNA (972bp) protein (324aa)
ferredoxin; K03863 vanillate monooxygenase [EC:1.14.13.82] id=5082193 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ferredoxin; K03863 vanillate monooxygenase [EC:1.14.13.82] rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying items 1-30 of 310 in total

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