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Ig3397_v2_scaffold_608

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_608_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..4986)
DNA (4986bp) protein (1662aa)
hypothetical protein, partial n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00037CB3CC rbh
heme peroxidase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_2
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5598..5837
DNA (240bp) protein (80aa)
Uncharacterized protein id=1268615 bin=GWE1_Burkholderiales_65_30 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5834..6688
DNA (855bp) protein (285aa)
peptidase M24A; K01265 methionyl aminopeptidase [EC:3.4.11.18] id=5082152 bin=GWF1_Burkholderiales_GWF1_66_17 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
peptidase M24A; K01265 methionyl aminopeptidase [EC:3.4.11.18] rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6695..7222)
DNA (528bp) protein (176aa)
hypothetical protein id=5082151 bin=GWF1_Burkholderiales_GWF1_66_17 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7247..7507)
DNA (261bp) protein (87aa)
SlyX; K03745 SlyX protein id=5082150 bin=GWF1_Burkholderiales_GWF1_66_17 species=Achromobacter arsenitoxydans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7654..8061)
DNA (408bp) protein (136aa)
msrB; peptide methionine sulfoxide reductase (protein-methionine-S-oxide reductase); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] id=5082149 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
msrB; peptide methionine sulfoxide reductase (protein-methionine-S-oxide reductase); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8073..9641)
DNA (1569bp) protein (523aa)
hypothetical protein id=5082148 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9759..11402
DNA (1644bp) protein (548aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] id=5082147 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
long-chain-fatty-acid--CoA ligase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11402..12676
DNA (1275bp) protein (425aa)
Extracellular ligand-binding receptor id=1268608 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12857..14089
DNA (1233bp) protein (411aa)
Candidate ABC type branched chain amino acid transport systems, periplasmic component id=1268607 bin=GWE1_Burkholderiales_65_30 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
branched chain amino acid ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14326..15348
DNA (1023bp) protein (341aa)
branched chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=5082144 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
branched chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_12
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15355..16647
DNA (1293bp) protein (431aa)
branched chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein id=5082143 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
branched chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16644..17486
DNA (843bp) protein (281aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein id=5082142 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_14
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17500..18195
DNA (696bp) protein (232aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein id=5082141 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ABC transporter rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18410..20518
DNA (2109bp) protein (703aa)
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] id=5082140 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_16
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20653..21828
DNA (1176bp) protein (392aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acetyltransferase id=1268601 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21838..22278
DNA (441bp) protein (147aa)
hypothetical protein id=5082138 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
thioesterase
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_18
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22342..23703
DNA (1362bp) protein (454aa)
hypothetical protein id=5082137 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23705..24037
DNA (333bp) protein (111aa)
Putative uncharacterized protein id=1268598 bin=GWE1_Burkholderiales_65_30 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24085..25053
DNA (969bp) protein (323aa)
hypothetical protein id=5082135 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_21
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25089..26327)
DNA (1239bp) protein (413aa)
carboxymethylenebutenolidase (dienelactone hydrolase) (dlh) (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] rbh
Carboxymethylenebutenolidase (Dienelactone hydrolase) (Dlh) n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SAE6_9BURK rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26324..26881)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035F03DF
flavin reductase domain-containing protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_23
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26934..28166)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JVL3_9BURK rbh
putative NAD(P)-binding protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28270..29073)
DNA (804bp) protein (268aa)
short-chain dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI0003758F88 rbh
putative oxidoreductase, SDR family rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_25
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29267..30298
DNA (1032bp) protein (344aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Variovorax sp. CF313 RepID=J2KFJ2_9BURK rbh
AraC family transcriptional regulator rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_26
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30336..32159
DNA (1824bp) protein (608aa)
Butyryl-CoA dehydrogenase id=1268596 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32184..32975
DNA (792bp) protein (264aa)
gluconate 5-dehydrogenase (EC:1.1.1.69) rbh
Gluconate 5-dehydrogenase id=1268595 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_28
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32976..33401
DNA (426bp) protein (142aa)
Uncharacterized protein id=1268594 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
phenylacetic acid degradation-like protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33401..34198
DNA (798bp) protein (266aa)
short-chain dehydrogenase/reductase SDR id=5082131 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
short-chain dehydrogenase/reductase SDR rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Ig3397_v2_scaffold_608_30
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34222..35235
DNA (1014bp) protein (338aa)
Alcohol dehydrogenase zinc-binding domain protein id=1268592 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
alcohol dehydrogenase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying items 1-30 of 57 in total

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