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Ig3397_v2_scaffold_2493

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_2493_1
unknown

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3..725
DNA (723bp) protein (241aa)

This feature has no annotations

Ig3397_v2_scaffold_2493_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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926..1168
DNA (243bp) protein (81aa)
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F704_9DELT
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig3397_v2_scaffold_2493_3
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1165..1590
DNA (426bp) protein (142aa)
PilT domain-containing protein n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CWE2_9BACT
PilT protein domain-containing protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig3397_v2_scaffold_2493_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1777..2001
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKR0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67707.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Ig3397_v2_scaffold_2493_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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1998..2294
DNA (297bp) protein (99aa)
Plasmid stabilization system id=4481207 bin=GWC2_Syntrophobacterales_56_13 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
plasmid stabilization system
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Ig3397_v2_scaffold_2493_6
unknown

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2407..2724
DNA (318bp) protein (106aa)

This feature has no annotations

Ig3397_v2_scaffold_2493_7
R_NC10_66_22, NC10, Bacteria

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2737..3075
DNA (339bp) protein (113aa)
Transcriptional regulator, XRE family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JC37_9ALTE
XRE family plasmid maintenance system antidote protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Ig3397_v2_scaffold_2493_8
unknown

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3169..3810
DNA (642bp) protein (214aa)

This feature has no annotations

Ig3397_v2_scaffold_2493_9
unknown

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3788..3976
DNA (189bp) protein (63aa)

This feature has no annotations

Ig3397_v2_scaffold_2493_10
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3973..4179
DNA (207bp) protein (69aa)
AbrB family transcriptional regulator id=8267199 bin=CD_OP8_4m species=Thioalkalivibrio sp. AKL17 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
AbrB family transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_65_10_curated
Ig3397_v2_scaffold_2493_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4176..4556
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALSr1 RepID=UPI0003765098
PilT domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Ig3397_v2_scaffold_2493_12
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4652..5278
DNA (627bp) protein (209aa)
Pedicted SAM-dependent methyltransferase n=1 Tax=Desulfovibrio sp. X2 RepID=S7TKX0_9DELT
Pedicted SAM-dependent methyltransferase {ECO:0000313|EMBL:EPR37536.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
pedicted SAM-dependent methyltransferase
Ig3397_v2_scaffold_2493_13
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5419..5877
DNA (459bp) protein (153aa)
diadenosine tetraphosphatehydrolase n=1 Tax=Serratia marcescens RepID=UPI0002D57388
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:AGE20447.1}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
Ig3397_v2_scaffold_2493_14
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5994..6554
DNA (561bp) protein (187aa)
Dihydrofolate reductase n=1 Tax=Frankia sp. QA3 RepID=I9KJ96_9ACTO
Dihydrofolate reductase {ECO:0000313|EMBL:EIV94318.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
bifunctional deaminase/reductase
Ig3397_v2_scaffold_2493_15
unknown

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6782..7114
DNA (333bp) protein (111aa)

This feature has no annotations

Ig3397_v2_scaffold_2493_16
Nostoc commune, Nostoc, Nostocales, Cyanobacteria, Bacteria

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7111..7431
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00037C4614
Transcriptional regulator {ECO:0000313|EMBL:ADO19073.1}; TaxID=676037 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc flagelliforme str. Sunitezuoqi.;"
transcriptional regulator, XRE family
Ig3397_v2_scaffold_2493_17
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7435..8349
DNA (915bp) protein (305aa)
Addiction module antidote protein, HigA family n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1F2_NITHN
HigA family addiction module antidote protein
Addiction module antidote protein, HigA family {ECO:0000313|EMBL:ADE16504.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Ig3397_v2_scaffold_2493_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8375..8785)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000367B280
doc; Death on curing protein; K07341 death on curing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Ig3397_v2_scaffold_2493_19
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8785..9012)
DNA (228bp) protein (76aa)
hypothetical protein id=12556667 bin=CNBR_ACIDO species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
addiction module antidote
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig3397_v2_scaffold_2493_20
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9109..10065)
DNA (957bp) protein (319aa)
Integrase core domain protein n=1 Tax=Vibrio cholerae HE-16 RepID=K2WME2_VIBCL rbh
Transposase {ECO:0000313|EMBL:EFH74996.1}; TaxID=345074 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae RC385.;"
transposase rbh
Ig3397_v2_scaffold_2493_21
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

10454..11125
DNA (672bp) protein (224aa)
Putative TetR family transcriptional regulator n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B4Z4_RHOOB
TetR family transcriptional regulator
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig3397_v2_scaffold_2493_22
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

11188..11829
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P9C1_9ACTO
alcohol dehydrogenase
Tax=BJP_IG2102_Coriobacteriales_64_17
Displaying 22 items

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