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Ig3397_v2_scaffold_2065

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_2065_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(2..787)
DNA (786bp) protein (262aa)
Flagellin domain protein id=3910207 bin=GWB1_CP_36_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
flagellin domain-containing protein; K02406 flagellin
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2065_2
unknown

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1104..1913
DNA (810bp) protein (270aa)

This feature has no annotations

Ig3397_v2_scaffold_2065_3
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2039..2587)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE9 RepID=UPI0003621EE8
Uncharacterized protein {ECO:0000313|EMBL:AHE96990.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
protein of unknown function DUF302
Ig3397_v2_scaffold_2065_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

2651..3994
DNA (1344bp) protein (448aa)
Stage II sporulation protein E id=3960299 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
integral membrane sensor hybrid histidine kinase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2065_5
unknown

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3984..4109
DNA (126bp) protein (42aa)

This feature has no annotations

Ig3397_v2_scaffold_2065_6
unknown

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4119..4352
DNA (234bp) protein (78aa)

This feature has no annotations

Ig3397_v2_scaffold_2065_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4416..5222
DNA (807bp) protein (269aa)
DNA-3-methyladenine glycosylase I; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase n=1 Tax=Paenibacillus ginsengihumi RepID=UPI000379E494
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig3397_v2_scaffold_2065_8
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5258..5704)
DNA (447bp) protein (149aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CF34
CDP-alcohol phosphatidyltransferase
Tax=GWE2_Bacteroidetes_42_39_curated
Ig3397_v2_scaffold_2065_9
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

5964..6281
DNA (318bp) protein (106aa)
id=3566335 bin=GWA1_Treponema_62_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Tax=GWC1_Treponema_61_84_curated
Ig3397_v2_scaffold_2065_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(6328..7743)
DNA (1416bp) protein (472aa)
id=2957291 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2065_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(8092..9060)
DNA (969bp) protein (323aa)
Lipase id=3758610 bin=GWB1_CP_36_13 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
lipase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2065_12
unknown

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9221..10327
DNA (1107bp) protein (369aa)

This feature has no annotations

Ig3397_v2_scaffold_2065_13
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10520..13171
DNA (2652bp) protein (884aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUR2_SYNAS
Tax=BJP_IG2069_Syntrophobacterales_46_30
Ig3397_v2_scaffold_2065_14
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13171..13956
DNA (786bp) protein (262aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUR3_SYNAS
Tax=BJP_IG2069_Syntrophobacterales_46_30
Displaying 14 items

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