ggKbase home page

Ig3397_v2_scaffold_2080

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_2080_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(1..882)
DNA (882bp) protein (294aa)
Bifunctional protein FolD id=3802688 bin=GWB1_CP_36_13 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
methenyltetrahydrofolate cyclohydrolase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2080_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(1048..2805)
DNA (1758bp) protein (586aa)
Uncharacterized protein id=3800377 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2080_3
unknown

Not on your lists

3026..3649
DNA (624bp) protein (208aa)

This feature has no annotations

Ig3397_v2_scaffold_2080_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(3669..6056)
DNA (2388bp) protein (796aa)
Putative low-complexity protein id=3430928 bin=GWB1_CP_36_13 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
rfrA pentapeptide repeat-containing protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2080_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

6301..7917
DNA (1617bp) protein (539aa)
PBS lyase HEAT domain protein repeat-containing protein id=3430931 bin=GWB1_CP_36_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
PBS lyase HEAT domain-containing protein repeat-containing protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2080_trna_1
unknown

Not on your lists

8069..8141
DNA (73bp)
transferRNA
Ig3397_v2_scaffold_2080_6
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8232..9164)
DNA (933bp) protein (311aa)
Exopolyphosphatase-related protein n=2 Tax=Oscillatoria RepID=D8G5F9_9CYAN
Exopolyphosphatase-related protein {ECO:0000313|EMBL:CBN57849.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
phosphoesterase DHHA1
Ig3397_v2_scaffold_2080_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

9273..10553
DNA (1281bp) protein (427aa)
hypothetical protein; K03465 thymidylate synthase (FAD) [EC:2.1.1.148]
ThyX id=3319503 bin=GWB1_CP_36_13 species=Clostridium kluyveri genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2080_8
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

10950..11597
DNA (648bp) protein (216aa)
Ankyrin repeat protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2DNJ0_TRIVA
ankyrin repeat protein
Ankyrin repeat protein, putative {ECO:0000313|EMBL:EAY17993.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
Ig3397_v2_scaffold_2080_9
unknown

Not on your lists

11669..12448
DNA (780bp) protein (260aa)

This feature has no annotations

Ig3397_v2_scaffold_2080_10
unknown

Not on your lists

12658..13404
DNA (747bp) protein (249aa)

This feature has no annotations

Ig3397_v2_scaffold_2080_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

13483..13878
DNA (396bp) protein (132aa)
id=3939692 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
76K protein
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 12 items

View Taxonomy