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Ig3397_v2_scaffold_2201

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_2201_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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42..1262
DNA (1221bp) protein (407aa)
ABC transporter substrate-binding protein id=3987555 bin=GWB1_CP_36_13 species=Mesotoga sp. PhosAc3 genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2201_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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1288..2544
DNA (1257bp) protein (419aa)
ABC transporter substrate-binding protein id=3987555 bin=GWB1_CP_36_13 species=Mesotoga sp. PhosAc3 genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2201_3
unknown

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2528..2719
DNA (192bp) protein (64aa)

This feature has no annotations

Ig3397_v2_scaffold_2201_4
bacterium UASB270, Bacteria

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2716..5043
DNA (2328bp) protein (776aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
PAS sensor protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NVY1_9FIRM rbh
multi-sensor signal transduction histidine kinase rbh
Ig3397_v2_scaffold_2201_5
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5127..7223
DNA (2097bp) protein (699aa)
Sensory box histidine kinase/response regulator n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SWA7_JANMA rbh
sensory box histidine kinase/response regulator rbh
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:ABR90656.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
Ig3397_v2_scaffold_2201_6
unknown

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comp(7220..7408)
DNA (189bp) protein (63aa)

This feature has no annotations

Ig3397_v2_scaffold_2201_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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7524..8063
DNA (540bp) protein (180aa)
Holliday junction resolvase-like protein id=5799601 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Ig3397_v2_scaffold_2201_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(8077..10152)
DNA (2076bp) protein (692aa)
Serine phosphatase RsbU, regulator of sigma subunit id=3331497 bin=GWB1_CP_36_13 species=Leptospira biflexa genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
protein serine/threonine phosphatase with extracellular sensor
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2201_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(10179..11105)
DNA (927bp) protein (309aa)
transketolase, C-terminal subunit; K00615 transketolase [EC:2.2.1.1]
Transketolase, pyridine binding subunit id=3331496 bin=GWB1_CP_36_13 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2201_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(11172..11990)
DNA (819bp) protein (273aa)
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase subunit A id=3331495 bin=GWB1_CP_36_13 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2201_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(12091..12846)
DNA (756bp) protein (252aa)
id=3331494 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 11 items

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