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Ig3397_v2_scaffold_2526

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_2526_1
unknown

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72..239
DNA (168bp) protein (56aa)

This feature has no annotations

Ig3397_v2_scaffold_2526_2
Bacillus alcalophilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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286..642
DNA (357bp) protein (119aa)
Glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Uncharacterized protein n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8TV98_BACAO
Uncharacterized protein {ECO:0000313|EMBL:KGA98802.1}; TaxID=1218173 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus alcalophilus ATCC 27647.;"
Ig3397_v2_scaffold_2526_3

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695..934
DNA (240bp) protein (80aa)
Marine sediment metagenome DNA, contig: S01H4_S16702 {ECO:0000313|EMBL:GAH17620.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ig3397_v2_scaffold_2526_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(943..1239)
DNA (297bp) protein (99aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein id=2553490 bin=GWB1_CP_36_13 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
4Fe-4S binding protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2526_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(1248..2315)
DNA (1068bp) protein (356aa)
CO dehydrogenase/acetyl-CoA synthase subunit gamma-like protein id=2553486 bin=GWB1_CP_36_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
CO dehydrogenase/acetyl-CoA synthase subunit gamma-like protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2526_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(2335..2787)
DNA (453bp) protein (151aa)
Regulatory protein MarR id=2553480 bin=GWB1_CP_36_13 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
transcriptional regulator, MarR family
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2526_7
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2912..3568
DNA (657bp) protein (219aa)
Putative peptidoglycan peptidase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L0Q4_HALH1
peptidoglycan peptidase
Putative peptidoglycan peptidase {ECO:0000313|EMBL:AEE49536.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Ig3397_v2_scaffold_2526_8
Alkalibacterium sp. AK22, Alkalibacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3583..4536)
DNA (954bp) protein (318aa)
Putative lipoprotein {ECO:0000313|EMBL:EXJ22962.1}; TaxID=1229520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alkalibacterium.;" source="Alkalibacterium sp. AK22.;"
Putative uncharacterized protein id=2780354 bin=GWB1_Spirochaetes_59_5 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Ig3397_v2_scaffold_2526_9
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4636..7800)
DNA (3165bp) protein (1055aa)
PAS/PAC sensor hybrid histidine kinase id=2025904 bin=GWE2_Spirochaete_31_10 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good + rbh
PAS domain-containing protein rbh
Tax=GWB2_Desulfobacterales_56_26_curated
Ig3397_v2_scaffold_2526_10
unknown

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7954..9081
DNA (1128bp) protein (376aa)

This feature has no annotations

Ig3397_v2_scaffold_2526_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(9049..10563)
DNA (1515bp) protein (505aa)
Binding-protein-dependent transport systems inner membrane component id=2666213 bin=GWB1_CP_36_13 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_2526_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(10567..11694)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein id=2622711 bin=GWB1_CP_36_13 species=Arcobacter sp. L genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 12 items

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