ggKbase home page

Ig3397_v2_scaffold_529

Search features with annotation key words

Displaying items 31-43 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_529_30
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

28556..28984
DNA (429bp) protein (143aa)
Acyl-CoA thioesterase id=3713886 bin=GWB1_CP_36_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
thioesterase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_31
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(29236..30879)
DNA (1644bp) protein (548aa)
SulP family sulfate permease n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AK02_IGNAJ rbh
SulP family sulfate permease; K03321 sulfate permease, SulP family rbh
SulP family sulfate permease {ECO:0000313|EMBL:AFH49309.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Ig3397_v2_scaffold_529_32
unknown

Not on your lists

31359..31964
DNA (606bp) protein (202aa)

This feature has no annotations

Ig3397_v2_scaffold_529_33
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(32757..34226)
DNA (1470bp) protein (490aa)
Putative uncharacterized protein id=4060995 bin=GWB1_CP_36_13 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_34
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(34226..35026)
DNA (801bp) protein (267aa)
Putative uncharacterized protein id=4060994 bin=GWB1_CP_36_13 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_35
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(35046..38015)
DNA (2970bp) protein (990aa)
Exporter of the RND superfamily protein id=4060993 bin=GWB1_CP_36_13 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
RND superfamily exporter; K07003
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_36
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38797..40137)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00030DFC3B
Uncharacterized protein {ECO:0000313|EMBL:KCZ48243.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
acyltransferase family protein
Ig3397_v2_scaffold_529_37
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(40162..42180)
DNA (2019bp) protein (673aa)
ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
ATP-dependent DNA helicase Rep id=3161713 bin=GWB1_CP_36_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_38
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

42333..42785
DNA (453bp) protein (151aa)
id=3680893 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_39
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

42778..43053
DNA (276bp) protein (92aa)
Uncharacterized protein id=3680891 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_40
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(43066..44016)
DNA (951bp) protein (317aa)
Beta-lactamase domain protein id=3662525 bin=GWB1_CP_36_13 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Zn-dependent hydrolase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_41
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(44066..44506)
DNA (441bp) protein (147aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase id=3834627 bin=GWB1_CP_36_13 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
anti-sigma-factor antagonist
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_42
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(44499..44876)
DNA (378bp) protein (126aa)
queuosine biosynthesis protein QueD; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-carboxy-5,6,7,8-tetrahydropterin synthase id=3834630 bin=GWB1_CP_36_13 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Displaying items 31-43 of 43 in total

View Taxonomy