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Ig3397_v2_scaffold_529

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_529_1
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..320)
DNA (318bp) protein (106aa)
Anthranilate synthase component II {ECO:0000313|EMBL:AIW12822.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AIW12822.1};; TaxID=1051646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
para-aminobenzoate synthase component II (EC:2.6.1.85); K01664 para-aminobenzoate synthetase component II [EC:2.6.1.85]
Para-aminobenzoate synthase component II n=2 Tax=Vibrio tubiashii RepID=F9T833_9VIBR
Ig3397_v2_scaffold_529_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(509..1990)
DNA (1482bp) protein (494aa)
Peptidyl-Asp metallopeptidase. Metallo peptidase. MEROPS family M72 id=3306841 bin=GWB1_CP_36_13 species=Trichodesmium erythraeum genus=Trichodesmium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(2253..3704)
DNA (1452bp) protein (484aa)
Radical SAM domain protein id=3758618 bin=GWB1_CP_36_13 species=Treponema succinifaciens genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
radical SAM protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(3704..4039)
DNA (336bp) protein (112aa)
Putative uncharacterized protein id=3758617 bin=GWB1_CP_36_13 species=Flavobacteria bacterium MS024-2A genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(4041..5471)
DNA (1431bp) protein (477aa)
id=3758616 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_6
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5911..7659
DNA (1749bp) protein (583aa)
Cytochrome C family protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M506_GEODF
cytochrome C family protein
Cytochrome c, 20 heme-binding sites {ECO:0000313|EMBL:ACM21690.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Ig3397_v2_scaffold_529_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(7708..9234)
DNA (1527bp) protein (509aa)
Putative chaperone id=2622872 bin=GWB1_CP_36_13 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Putative chaperone; K07391 magnesium chelatase family protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_8
unknown

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9291..9395
DNA (105bp) protein (35aa)

This feature has no annotations

Ig3397_v2_scaffold_529_9
unknown

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9893..10249
DNA (357bp) protein (119aa)

This feature has no annotations

Ig3397_v2_scaffold_529_10
unknown

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10322..10450
DNA (129bp) protein (43aa)

This feature has no annotations

Ig3397_v2_scaffold_529_11
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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10591..11019
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Treponema denticola RepID=M2BSQ7_TREDN
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
Ig3397_v2_scaffold_529_12
unknown

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comp(11162..12151)
DNA (990bp) protein (330aa)

This feature has no annotations

Ig3397_v2_scaffold_529_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

12378..13316
DNA (939bp) protein (313aa)
id=3939098 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_14
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

13505..14107
DNA (603bp) protein (201aa)
Putative uncharacterized protein id=3939096 bin=GWB1_CP_36_13 species=unknown genus=Grimontia taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
membrane protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_15
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

14217..15488
DNA (1272bp) protein (424aa)
Putative uncharacterized protein id=3939094 bin=GWB1_CP_36_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein; K09859 hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_16
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

15618..16247
DNA (630bp) protein (210aa)
Uncharacterized protein id=3939092 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
methyltransferase family protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_17
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

16250..16726
DNA (477bp) protein (159aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA/protein-cysteine methyltransferase id=3933870 bin=GWB1_CP_36_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=RBG_16_Spirochaetes_49_21_curated
Ig3397_v2_scaffold_529_18
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

16766..17824
DNA (1059bp) protein (353aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.192)
Dual-specificity RNA methyltransferase RlmN id=2650094 bin=GWB1_CP_36_13 species=Rickettsiella grylli genus=Rickettsiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_19
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

17852..19132
DNA (1281bp) protein (427aa)
thrA; homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3] rbh
Homoserine dehydrogenase id=2535540 bin=GWB1_CP_36_13 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_20
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

19136..19630
DNA (495bp) protein (165aa)
id=3562878 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_21
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

19652..22144
DNA (2493bp) protein (831aa)
Putative penicillin-binding protein 1A id=2580528 bin=GWB1_CP_36_13 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
penicillin-binding protein 1A rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_22
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

22191..22694
DNA (504bp) protein (168aa)
Thioredoxin-related protein-like protein id=3562876 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
Ig3397_v2_scaffold_529_23
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

22816..23775
DNA (960bp) protein (320aa)
Iron-sulfur cluster-binding protein id=3233275 bin=GWB1_CP_36_13 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
iron-sulfur cluster-binding protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_24
unknown

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comp(23779..24120)
DNA (342bp) protein (114aa)

This feature has no annotations

Ig3397_v2_scaffold_529_25
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(24580..25659)
DNA (1080bp) protein (360aa)
Signal transduction histidine kinase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T842_METSL
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:ADZ09668.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
Ig3397_v2_scaffold_529_trna_1
unknown

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comp(25851..25934)
DNA (84bp)
transferRNA
Ig3397_v2_scaffold_529_26
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

26128..26595
DNA (468bp) protein (156aa)
Putative signal transduction protein with CBS domains id=3673768 bin=GWB1_CP_36_13 species=Aciduliprofundum boonei genus=Aciduliprofundum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
cbs domain containing membrane protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_27
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

26614..26913
DNA (300bp) protein (100aa)
id=3673688 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_28
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

26924..28117
DNA (1194bp) protein (398aa)
poly(R)-hydroxyalkanoic acid synthase subunit PhaC; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit id=3673687 bin=GWB1_CP_36_13 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_529_29
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

28253..28537
DNA (285bp) protein (95aa)
Stress responsive alpha-beta barrel domain-containing protein n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GDH1_SPITZ
stress responsive alpha-beta barrel domain-containing protein
Stress responsive alpha-beta barrel domain-containing protein {ECO:0000313|EMBL:AEJ61318.1}; TaxID=869211 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
Displaying items 1-30 of 43 in total

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