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Ig3397_v2_scaffold_626

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_626_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(1..213)
DNA (213bp) protein (71aa)
id=3474810 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(344..1888)
DNA (1545bp) protein (515aa)
id=3247753 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(1898..2776)
DNA (879bp) protein (293aa)
UDP-N-acetylmuramate dehydrogenase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158]
UDP-N-acetylenolpyruvoylglucosamine reductase id=3183889 bin=GWB1_CP_36_13 species=Borrelia spielmanii genus=Borrelia taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(2773..3531)
DNA (759bp) protein (253aa)
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-]
Imidazole glycerol phosphate synthase subunit HisF id=3183886 bin=GWB1_CP_36_13 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(3535..5445)
DNA (1911bp) protein (637aa)
Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase id=3183749 bin=GWB1_CP_36_13 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

5758..6864
DNA (1107bp) protein (369aa)
class I and II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1]
Aspartate aminotransferase id=3247768 bin=GWB1_CP_36_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

6870..7496
DNA (627bp) protein (209aa)
Bifunctional endo-1,4-beta-xylanase xylA, putative id=3247770 bin=GWB1_CP_36_13 species=Tetrahymena thermophila genus=Tetrahymena taxon_order=Hymenostomatida taxon_class=Oligohymenophorea phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_8
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

Not on your lists

comp(8186..9550)
DNA (1365bp) protein (455aa)
Diguanylate cyclase (GGDEF) domain protein id=2547987 bin=GWF1_Spirochaetes_51_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Tax=GWF1_Spirochaetes_51_8_curated
Ig3397_v2_scaffold_626_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(9550..11337)
DNA (1788bp) protein (596aa)
MJ0042 family finger-like protein id=3767361 bin=GWB1_CP_36_13 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(11531..12088)
DNA (558bp) protein (186aa)
competence protein ComEA helix-hairpin-helix repeat region domain protein id=3767360 bin=GWB1_CP_36_13 species=Clostridium pasteurianum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(12085..12756)
DNA (672bp) protein (224aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=3767359 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(12753..13979)
DNA (1227bp) protein (409aa)
ribosomal protein S12 methylthiotransferase RimO; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]
Ribosomal protein S12 methylthiotransferase RimO id=3767358 bin=GWB1_CP_36_13 species=Marinitoga piezophila genus=Marinitoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(13999..15099)
DNA (1101bp) protein (367aa)
Putative uncharacterized protein id=3767357 bin=GWB1_CP_36_13 species=Treponema succinifaciens genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_14
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(15114..15797)
DNA (684bp) protein (228aa)
id=3767356 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_15
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(15986..20860)
DNA (4875bp) protein (1625aa)
multi-sensor hybrid multi-kinase id=3793576 bin=GWB1_CP_36_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
ATP-binding region ATPase domain protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_16
unknown

Not on your lists

comp(21267..22031)
DNA (765bp) protein (255aa)

This feature has no annotations

Ig3397_v2_scaffold_626_17
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

Not on your lists

comp(22132..22614)
DNA (483bp) protein (161aa)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE97_SINAD
methionine-S-sulfoxide reductase
Tax=RBG_13_Spirochaetes_51_14_curated
Ig3397_v2_scaffold_626_18
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22611..23045)
DNA (435bp) protein (145aa)
peptide methionine sulfoxide reductase; K12267 peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
Peptide methionine sulfoxide reductase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ55_SYNAS
Methionine sulfoxide reductase {ECO:0000313|EMBL:AIE18335.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
Ig3397_v2_scaffold_626_19
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

23455..24489
DNA (1035bp) protein (345aa)
Lipase id=3758610 bin=GWB1_CP_36_13 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
lipase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_20
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24569..25522)
DNA (954bp) protein (318aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TX92_9GAMM
Nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGS39755.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus zancles 7-ME.;"
Ig3397_v2_scaffold_626_21
unknown

Not on your lists

25607..26434
DNA (828bp) protein (276aa)

This feature has no annotations

Ig3397_v2_scaffold_626_22
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(26449..27729)
DNA (1281bp) protein (427aa)
Serine/threonine protein kinase id=2622897 bin=GWB1_CP_36_13 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
sodium proline symporter, GAF and serine phosphatase domain protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_23
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(27714..28736)
DNA (1023bp) protein (341aa)
poly-beta-hydroxybutyrate polymerase n=1 Tax=Peptoniphilus lacrimalis RepID=UPI00038132A7
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
Tax=RBG_13_Chloroflexi_50_10_curated
Ig3397_v2_scaffold_626_24
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(28846..29736)
DNA (891bp) protein (297aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase id=3963951 bin=GWB1_CP_36_13 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_25
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists


comp(29833..32406)
DNA (2574bp) protein (858aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase id=3331500 bin=GWB1_CP_36_13 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_26
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(32561..34363)
DNA (1803bp) protein (601aa)
Methanoculleus bourgensis MS2 complete genome id=3703696 bin=GWB1_CP_36_13 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
putative NHL repeat containing protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_27
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34773..36272
DNA (1500bp) protein (500aa)
Photosystem I P700 chlorophyll a apoprotein A2 {ECO:0000313|EMBL:KHJ38507.1}; EC=1.97.1.12 {ECO:0000313|EMBL:KHJ38507.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003774A2A
OmpA/MotB domain-containing protein
Ig3397_v2_scaffold_626_28
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

Not on your lists

comp(36399..37385)
DNA (987bp) protein (329aa)
Uncharacterized protein id=2446355 bin=GWF1_Spirochaetes_51_8 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
hypothetical protein
Tax=GWF1_Spirochaetes_51_8_curated
Ig3397_v2_scaffold_626_29
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

37579..38157
DNA (579bp) protein (193aa)
Peptidoglycan-binding lysin domain-containing protein id=3886411 bin=GWB1_CP_36_13 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_626_30
unknown

Not on your lists

38245..38505
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 30 items

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