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Ig3397_v2_scaffold_658

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_658_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

3..890
DNA (888bp) protein (296aa)
membrane-bound lytic murein transglycosylase D (EC:3.2.1.-)
Lytic transglycosylase catalytic id=4006046 bin=GWB1_CP_36_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_2
unknown

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1174..1404
DNA (231bp) protein (77aa)

This feature has no annotations

Ig3397_v2_scaffold_658_3
unknown

Not on your lists

1900..2397
DNA (498bp) protein (166aa)

This feature has no annotations

Ig3397_v2_scaffold_658_4
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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2397..4409
DNA (2013bp) protein (671aa)
TonB-dependent receptor-related protein n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KDV9_CHLTE
TonB-dependent receptor-like protein; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor-related protein {ECO:0000313|EMBL:AAM72170.1}; TaxID=194439 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 /; TLS).;"
Ig3397_v2_scaffold_658_5
unknown

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4444..4536
DNA (93bp) protein (31aa)

This feature has no annotations

Ig3397_v2_scaffold_658_6
Sulfurihydrogenibium yellowstonense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

4566..5183
DNA (618bp) protein (206aa)
Alkyl hydroperoxide reductase, C subunit {ECO:0000313|EMBL:EEP59791.1}; EC=1.8.4.- {ECO:0000313|EMBL:EEP59791.1};; TaxID=432331 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogenibium yellowstonense SS-5.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] rbh
Alkyl hydroperoxide reductase, C subunit n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FMB0_9AQUI rbh
Ig3397_v2_scaffold_658_7
unknown

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5243..5521
DNA (279bp) protein (93aa)

This feature has no annotations

Ig3397_v2_scaffold_658_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

5613..6605
DNA (993bp) protein (331aa)
Phosphoribosylformylglycinamidine cyclo-ligase id=3932939 bin=GWB1_CP_36_13 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
phosphoribosylformylglycinamidine cyclo-ligase rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

6602..6949
DNA (348bp) protein (116aa)
Nitrogen regulatory protein P-II id=3932940 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_10
unknown

Not on your lists

6946..7134
DNA (189bp) protein (63aa)

This feature has no annotations

Ig3397_v2_scaffold_658_11
Aquifex aeolicus, Aquifex, Aquificales, Aquificae, Aquificae, Bacteria

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7140..8072
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O67352_AQUAE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAC07321.1}; TaxID=224324 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.;" source="Aquifex aeolicus (strain VF5).;"
Ig3397_v2_scaffold_658_12
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8041..8790
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GH78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AHF05850.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
putative metal-dependent hydrolase; K07043
Ig3397_v2_scaffold_658_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(8867..9289)
DNA (423bp) protein (141aa)
Type IV pilus assembly protein PilZ id=2643883 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_14
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(9282..9725)
DNA (444bp) protein (148aa)
id=2643881 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_15
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(9819..10085)
DNA (267bp) protein (89aa)
id=2643879 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_16
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(10091..10876)
DNA (786bp) protein (262aa)
id=2643878 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_17
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(10873..11598)
DNA (726bp) protein (242aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase id=2643873 bin=GWB1_CP_36_13 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_18
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(11713..12441)
DNA (729bp) protein (243aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase (Fragment) id=2643870 bin=GWB1_CP_36_13 species=human gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_19
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(12420..13142)
DNA (723bp) protein (241aa)
birA; BirA bifunctional protein (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPQ5_9BACT
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:BAL58141.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Ig3397_v2_scaffold_658_20
unknown

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comp(13139..13330)
DNA (192bp) protein (64aa)

This feature has no annotations

Ig3397_v2_scaffold_658_21
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13340..14176)
DNA (837bp) protein (279aa)
Putative dioxygenase id=3680731 bin=GWB1_CP_36_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein; K06990
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Ig3397_v2_scaffold_658_22
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(14191..14973)
DNA (783bp) protein (261aa)
Thiazole synthase id=3680829 bin=GWB1_CP_36_13 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG rbh
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
Ig3397_v2_scaffold_658_23
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


comp(14978..16234)
DNA (1257bp) protein (419aa)
histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
Histidine--tRNA ligase n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J631_MARPK
Ig3397_v2_scaffold_658_24
unknown

Not on your lists

16408..16569
DNA (162bp) protein (54aa)

This feature has no annotations

Ig3397_v2_scaffold_658_25
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(16953..17897)
DNA (945bp) protein (315aa)
id=4021986 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_26

Not on your lists

18094..20535
DNA (2442bp) protein (814aa)
adenylate/guanylate cyclase with Chase sensor; K01768 adenylate cyclase [EC:4.6.1.1]
Uncharacterized protein {ECO:0000313|EMBL:KKL77030.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Adenylate/guanylate cyclase with Chase sensor id=3140781 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Ig3397_v2_scaffold_658_27
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

20545..22245
DNA (1701bp) protein (567aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III subunit gamma/tau id=3263625 bin=GWB1_CP_36_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_28
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

22242..22568
DNA (327bp) protein (109aa)
Nucleoid-associated protein Dalk_1999 id=3263564 bin=GWB1_CP_36_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein; K09747 hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_29
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

22569..23168
DNA (600bp) protein (200aa)
Recombination protein RecR id=3263563 bin=GWB1_CP_36_13 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
recombination protein RecR; K06187 recombination protein RecR
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_658_30
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

23251..24408
DNA (1158bp) protein (386aa)
id=3263562 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Displaying items 1-30 of 42 in total

View Taxonomy