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Ig3397_v2_scaffold_884

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_884_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(1..810)
DNA (810bp) protein (270aa)
Putative uncharacterized protein id=3471275 bin=GWB1_CP_36_13 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

1170..2162
DNA (993bp) protein (331aa)
RNA polymerase sigma factor id=3471277 bin=GWB1_CP_36_13 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
sigma-70 family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_3
unknown

Not on your lists

comp(2192..2746)
DNA (555bp) protein (185aa)

This feature has no annotations

Ig3397_v2_scaffold_884_4
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

2785..3222
DNA (438bp) protein (146aa)
Polymer-forming cytoskeletal id=2869705 bin=GWF1_Spirochaetes_51_8 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
protein of unknown function DUF583
Tax=RBG_16_Spirochaetes_49_21_curated
Ig3397_v2_scaffold_884_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

3296..3853
DNA (558bp) protein (186aa)
Elongation factor P id=2622707 bin=GWB1_CP_36_13 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
efp; elongation factor P
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

3893..4639
DNA (747bp) protein (249aa)
HAMP domain protein id=2622686 bin=GWB1_CP_36_13 species=Photobacterium leiognathi genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
response regulator receiver protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

4636..5154
DNA (519bp) protein (173aa)
MotA/TolQ/ExbB proton channel id=2622679 bin=GWB1_CP_36_13 species=Arcobacter nitrofigilis genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
biopolymer transport protein ExbB
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

5156..6388
DNA (1233bp) protein (411aa)
HCC HlyC/CorC family transporter id=2622673 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6385..7623
DNA (1239bp) protein (413aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BVZ5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19348.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
Ig3397_v2_scaffold_884_10
unknown

Not on your lists

7739..8851
DNA (1113bp) protein (371aa)

This feature has no annotations

Ig3397_v2_scaffold_884_11
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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8891..9511
DNA (621bp) protein (207aa)
Putative metallophosphoesterase n=1 Tax=planctomycete KSU-1 RepID=I3IMB0_9PLAN
Putative metallophosphoesterase {ECO:0000313|EMBL:GAB62855.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein; K07096
Ig3397_v2_scaffold_884_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

9710..10234
DNA (525bp) protein (175aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase id=3336528 bin=GWB1_CP_36_13 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

10224..11156
DNA (933bp) protein (311aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
Methionyl-tRNA formyltransferase id=3336527 bin=GWB1_CP_36_13 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_14
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

11153..12133
DNA (981bp) protein (327aa)
serine/threonine protein kinase with PASTA sensor(s) (EC:2.7.11.25); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Serine/threonine protein kinase with PASTA sensor(S) id=3336526 bin=GWB1_CP_36_13 species=Acidaminococcus fermentans genus=Acidaminococcus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_15
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

12130..12792
DNA (663bp) protein (221aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase id=3336524 bin=GWB1_CP_36_13 species=Ruminococcus sp. SR1/5 genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_16
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

12782..13675
DNA (894bp) protein (298aa)
id=3336523 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_17
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

13672..14352
DNA (681bp) protein (227aa)
gph; phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Phosphatase id=3336520 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_18
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14342..14728
DNA (387bp) protein (129aa)
Thioesterase superfamily protein n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E2Y8_9FIRM
Thioesterase superfamily protein {ECO:0000313|EMBL:CCU80525.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
thioesterase superfamily protein
Ig3397_v2_scaffold_884_19
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

14673..15230
DNA (558bp) protein (186aa)
id=3848989 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_20
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

15220..16281
DNA (1062bp) protein (354aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Histidinol-phosphate aminotransferase id=3848990 bin=GWB1_CP_36_13 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_21
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

16269..17246
DNA (978bp) protein (326aa)
Lipoprotein, RlpA family id=3848991 bin=GWB1_CP_36_13 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
lipoprotein A; K03642 rare lipoprotein A
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_22
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

17210..19216
DNA (2007bp) protein (669aa)
Lytic transglycosylase catalytic; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
Transglycosylase, SLT family id=3848992 bin=GWB1_CP_36_13 species=unknown genus=Borrelia taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_23
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(19311..21578)
DNA (2268bp) protein (756aa)
Phosphoribosylamine--glycine ligase-like protein id=3526023 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
glycolate oxidase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_24
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(21582..22457)
DNA (876bp) protein (292aa)
Peptidase, M23 family id=3526017 bin=GWB1_CP_36_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
membrane protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_25
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(22511..23140)
DNA (630bp) protein (210aa)
tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (guanine-N(7)-)-methyltransferase id=3426718 bin=GWB1_CP_36_13 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_26
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

23489..25381
DNA (1893bp) protein (631aa)
Fibronectin type III domain protein id=3272071 bin=GWB1_CP_36_13 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_884_27
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25472..25741
DNA (270bp) protein (90aa)
UPF0237 protein Clo1100_2043 n=1 Tax=Clostridium sp. BNL1100 RepID=H2JCT3_9CLOT
ACT domain-containing protein; K07166 ACT domain-containing protein
UPF0237 protein Clo1100_2043 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
Ig3397_v2_scaffold_884_28
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25752..27110
DNA (1359bp) protein (453aa)
UPF0210 protein Ccel_1722 n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=Y1722_CLOCE rbh
hypothetical protein; K09157 hypothetical protein rbh
UPF0210 protein Ccel_1722 {ECO:0000255|HAMAP-Rule:MF_01221}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
Ig3397_v2_scaffold_884_29
unknown

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comp(27122..27673)
DNA (552bp) protein (184aa)

This feature has no annotations

Ig3397_v2_scaffold_884_30
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

Not on your lists

27951..28745
DNA (795bp) protein (265aa)
Chromosome segregation protein, putative id=1764951 bin=GWE2_Spirochaete_31_10 species=unknown genus=Borrelia taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
parA; partition protein, ParA-like protein; K03496 chromosome partitioning protein
Tax=GWE2_Spirochaetes_31_10_curated
Displaying items 1-30 of 31 in total

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