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Ig3397_v2_scaffold_1091

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1091_1
Leptospira wolbachii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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93..359
DNA (267bp) protein (89aa)
Homeodomain-like domain protein n=1 Tax=Leptospira wolbachii serovar Codice str. CDC RepID=R9A6M9_9LEPT
Homeodomain-like domain protein {ECO:0000313|EMBL:EOQ97841.1}; TaxID=1218599 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolbachii serovar Codice str. CDC.;"
transposase
Ig3397_v2_scaffold_1091_2
Leptospira wolbachii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

349..855
DNA (507bp) protein (169aa)
Integrase core domain protein n=1 Tax=Leptospira wolbachii serovar Codice str. CDC RepID=R9A6K4_9LEPT
Integrase core domain protein {ECO:0000313|EMBL:EOQ97833.1}; TaxID=1218599 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolbachii serovar Codice str. CDC.;"
integrase catalytic subunit
Ig3397_v2_scaffold_1091_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

986..1252
DNA (267bp) protein (89aa)
Putative uncharacterized protein id=2612545 bin=GWB1_CP_36_13 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1091_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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1391..1855
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=2612545 bin=GWB1_CP_36_13 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1091_5
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2061..2840)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EGH2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU88245.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
integrase
Ig3397_v2_scaffold_1091_6
unknown

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comp(2789..2962)
DNA (174bp) protein (58aa)

This feature has no annotations

Ig3397_v2_scaffold_1091_7
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3105..3941
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MKV8_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06028.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
Ig3397_v2_scaffold_1091_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

4086..4685
DNA (600bp) protein (200aa)
Putative uncharacterized protein id=3939096 bin=GWB1_CP_36_13 species=unknown genus=Grimontia taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
lipoprotein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1091_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(4813..5553)
DNA (741bp) protein (247aa)
Tetratricopeptide repeat-containing protein id=4006052 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1091_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(5669..6454)
DNA (786bp) protein (262aa)
Spore coat assembly protein SafA/uncharacterized protein, YkwD family id=4006053 bin=GWB1_CP_36_13 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
spore coat assembly protein SafA/uncharacterized protein, YkwD family
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1091_11
unknown

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6653..7567
DNA (915bp) protein (305aa)

This feature has no annotations

Ig3397_v2_scaffold_1091_12
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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7656..8102
DNA (447bp) protein (149aa)
phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type); K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69]
Phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QSF5_SPHPG
Phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) {ECO:0000313|EMBL:AEV30085.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Ig3397_v2_scaffold_1091_13
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8115..9356
DNA (1242bp) protein (414aa)
Kef-type K+ transport system, membrane component n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QSF4_SPHPG rbh
Kef-type K+ transport system membrane protein rbh
Kef-type K+ transport system, membrane component {ECO:0000313|EMBL:AEV30084.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Ig3397_v2_scaffold_1091_14
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9370..9687
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QSF3_SPHPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV30083.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Ig3397_v2_scaffold_1091_15
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

9733..10764
DNA (1032bp) protein (344aa)
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase id=4006055 bin=GWB1_CP_36_13 species=Eubacterium ventriosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1091_16
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

10850..11368
DNA (519bp) protein (173aa)
Putative uncharacterized protein id=4006056 bin=GWB1_CP_36_13 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
midasin; K13093 HIV Tat-specific factor 1
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1091_17
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

12327..12737
DNA (411bp) protein (137aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB id=4006057 bin=GWB1_CP_36_13 species=Treponema phagedenis genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
tRNA-i(6)A37 thiotransferase protein MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1091_18
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(12782..13384)
DNA (603bp) protein (201aa)
ppiB; peptidyl-prolyl cis-trans isomerase; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9A2_9DELT
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
Ig3397_v2_scaffold_1091_19
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13457..14029
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI0003695079
Tax=BJP_IG2069_Spirochaetales_48_31
Ig3397_v2_scaffold_1091_20
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14049..15476)
DNA (1428bp) protein (476aa)
Radical SAM domain iron-sulfur cluster-binding oxidoreductase id=3203684 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
hypothetical protein rbh
Tax=BJP_IG2157_Desulfuromonadales_56_134
Ig3397_v2_scaffold_1091_trna_1
unknown

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comp(15519..15592)
DNA (74bp)
transferRNA
Ig3397_v2_scaffold_1091_21
unknown

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comp(15649..16371)
DNA (723bp) protein (241aa)

This feature has no annotations

Ig3397_v2_scaffold_1091_22
unknown

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16733..16999
DNA (267bp) protein (89aa)

This feature has no annotations

Ig3397_v2_scaffold_1091_23
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

17077..18462
DNA (1386bp) protein (462aa)
Serine/threonine protein kinase id=2670641 bin=GWB1_CP_36_13 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
integral membrane sensor hybrid histidine kinase
Tax=GWF1_Spirochaetes_49_6_curated
Ig3397_v2_scaffold_1091_24
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(18457..20394)
DNA (1938bp) protein (646aa)
primosomal protein N; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
Primosome assembly protein PriA id=4006042 bin=GWB1_CP_36_13 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1091_25
unknown

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comp(20762..21484)
DNA (723bp) protein (241aa)

This feature has no annotations

Ig3397_v2_scaffold_1091_26
unknown

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comp(21568..22446)
DNA (879bp) protein (293aa)

This feature has no annotations

Ig3397_v2_scaffold_1091_27
CG_Nitrosp_01, Nitrospirae, Bacteria

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comp(22461..23933)
DNA (1473bp) protein (491aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27]
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00035F888F
Tax=CG_Nitrosp_01
Ig3397_v2_scaffold_1091_28
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(24180..24668)
DNA (489bp) protein (163aa)
Related to DNA gyrase inhibitory protein id=3707113 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1091_29
unknown

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comp(24728..25489)
DNA (762bp) protein (254aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

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