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Ig3397_v2_scaffold_1125

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1125_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase id=3515509 bin=GWB1_CP_36_13 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(220..789)
DNA (570bp) protein (190aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
5-formyltetrahydrofolate cyclo-ligase id=3515501 bin=GWB1_CP_36_13 species=Blautia hydrogenotrophica genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(776..1330)
DNA (555bp) protein (185aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 id=3515493 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(1333..1560)
DNA (228bp) protein (76aa)
phosphoribosylformylglycinamidine synthase PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase, PurS protein id=3515489 bin=GWB1_CP_36_13 species=unknown genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(1685..2575)
DNA (891bp) protein (297aa)
Flagellin/flagellar hook associated protein id=3419222 bin=GWB1_CP_36_13 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
flagellin domain-containing protein; K02406 flagellin
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(2716..3588)
DNA (873bp) protein (291aa)
Flagellar filament 34.5 kDa core protein (Class B) id=3419223 bin=GWB1_CP_36_13 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
flagellin domain-containing protein; K02406 flagellin
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

4177..5817
DNA (1641bp) protein (547aa)
protein kinase id=3726525 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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5878..6459
DNA (582bp) protein (194aa)
Transglycosylase SLT domain protein id=3726522 bin=GWB1_CP_36_13 species=Collinsella stercoris genus=Collinsella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
transglycosylase SLT domain-containing protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

6468..7124
DNA (657bp) protein (219aa)
PHP domain protein id=3726519 bin=GWB1_CP_36_13 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
phosphotransferase domain-containing protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

7262..8458
DNA (1197bp) protein (399aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase id=3858822 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_11
unknown

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comp(8576..8980)
DNA (405bp) protein (135aa)

This feature has no annotations

Ig3397_v2_scaffold_1125_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(8977..9369)
DNA (393bp) protein (131aa)
id=3703701 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(9366..10226)
DNA (861bp) protein (287aa)
pantothenate synthetase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1]
Pantothenate synthetase id=3793571 bin=GWB1_CP_36_13 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_14
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(10303..10962)
DNA (660bp) protein (220aa)
ribE; protein RibE (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit id=3793570 bin=GWB1_CP_36_13 species=Halobacillus sp. BAB-2008 genus=Halobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_15
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(10988..12163)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039A26A3
cation diffusion facilitator family transporter
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
Ig3397_v2_scaffold_1125_trna_1
unknown

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12662..12734
DNA (73bp)
transferRNA
Ig3397_v2_scaffold_1125_trna_2
unknown

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12752..12825
DNA (74bp)
transferRNA
Ig3397_v2_scaffold_1125_16
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12861..13265
DNA (405bp) protein (135aa)
Hemerythrin n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A2M0_MELRP
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:GAM10814.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hemerythrin
Ig3397_v2_scaffold_1125_17
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(13369..14676)
DNA (1308bp) protein (436aa)
multi-sensor hybrid multi-kinase id=3793576 bin=GWB1_CP_36_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
ATPase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_18
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(15028..15837)
DNA (810bp) protein (270aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F8R5_9THEM rbh
alpha/beta hydrolase rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AFK08318.1}; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;"
Ig3397_v2_scaffold_1125_19
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(15963..16868)
DNA (906bp) protein (302aa)
Putative ABC transport system substrate-binding protein id=3526130 bin=GWB1_CP_36_13 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Mammalian cell entry related domain-containing protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_20
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(16865..17608)
DNA (744bp) protein (248aa)
Ribonucleotide ABC transporter ATP-binding protein id=3526129 bin=GWB1_CP_36_13 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_21
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(17666..18934)
DNA (1269bp) protein (423aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-]
Putative peptidase id=3526044 bin=GWB1_CP_36_13 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_22
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

19079..19870
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
3-methyl-2-oxobutanoate hydroxymethyltransferase id=3526042 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1125_23
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19876..20784
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R4V2_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK82190.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
Ig3397_v2_scaffold_1125_24
unknown

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comp(20788..21390)
DNA (603bp) protein (201aa)

This feature has no annotations

Ig3397_v2_scaffold_1125_25
unknown

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comp(21657..22097)
DNA (441bp) protein (147aa)

This feature has no annotations

Ig3397_v2_scaffold_1125_26
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(22102..22479)
DNA (378bp) protein (126aa)
Sensory box protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QFP7_9CYAN
Sensory box protein {ECO:0000313|EMBL:ERT06779.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
integral membrane sensor hybrid histidine kinase
Ig3397_v2_scaffold_1125_27
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

23096..23374
DNA (279bp) protein (93aa)
Cupin domain {ECO:0000313|EMBL:AKG92351.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
Cupin 2 conserved barrel domain protein id=3441762 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Displaying 29 items

View Taxonomy