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Ig3397_v2_scaffold_1253

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1253_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(71..433)
DNA (363bp) protein (121aa)
aspartate 1-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
Aspartate 1-decarboxylase id=2631659 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1253_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(445..1377)
DNA (933bp) protein (311aa)
Carbohydrate kinase, PfkB family id=2631656 bin=GWB1_CP_36_13 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
PfkB protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1253_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(1575..3008)
DNA (1434bp) protein (478aa)
hypothetical protein; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
Putative uncharacterized protein id=3939194 bin=GWB1_CP_36_13 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1253_4
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

Not on your lists

comp(3562..4896)
DNA (1335bp) protein (445aa)
ATP-dependent RNA helicase, DEAD/DEAH box family protein id=2186440 bin=GWE2_Spirochaete_31_10 species=Bacillus sp. SG-1 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good + rbh
rhlE; ATP-dependent RNA helicase, DEAD/DEAH box family
Tax=GWE2_Spirochaetes_31_10_curated
Ig3397_v2_scaffold_1253_5
Pelodictyon phaeoclathratiforme, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(5049..5249)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SEF6_PELPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF43048.1}; TaxID=324925 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1).;"
Ig3397_v2_scaffold_1253_6
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(5246..5686)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SEF7_PELPB
hypothetical protein
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1253_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

5960..7327
DNA (1368bp) protein (456aa)
tRNA modification GTPase trmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE id=3708027 bin=GWB1_CP_36_13 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1253_8
unknown

Not on your lists

comp(7406..8032)
DNA (627bp) protein (209aa)

This feature has no annotations

Ig3397_v2_scaffold_1253_9
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

8337..8633
DNA (297bp) protein (99aa)
DNA polymerase beta domain protein region n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN03_ARCVS
DNA polymerase beta domain-containing protein; K07075
Tax=GWF1_Spirochaetes_49_6_curated
Ig3397_v2_scaffold_1253_10
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

8760..10565
DNA (1806bp) protein (602aa)
tau:Tola_2810 peptidase U32; K08303 putative protease [EC:3.4.-.-] id=18067 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
peptidase U32 family protein; K08303 putative protease [EC:3.4.-.-]
Tax=GWC2_Elusimicrobia_56_31_curated
Ig3397_v2_scaffold_1253_11
unknown

Not on your lists

comp(10721..11140)
DNA (420bp) protein (140aa)

This feature has no annotations

Ig3397_v2_scaffold_1253_12
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(11310..12185)
DNA (876bp) protein (292aa)
Drug/metabolite transporter (DMT) family permease id=3472645 bin=GWC1_Spirochaetes_27_15 species=Leptospira biflexa genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
drug/metabolite transporter
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1253_13
unknown

Not on your lists

comp(12284..12898)
DNA (615bp) protein (205aa)

This feature has no annotations

Ig3397_v2_scaffold_1253_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12909..13724)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI0003760588
Putative arylesterase, non-heme chloride peroxidase {ECO:0000313|EMBL:EFW92011.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
alpha/beta hydrolase fold
Ig3397_v2_scaffold_1253_15
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13728..14537)
DNA (810bp) protein (270aa)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
NADH pyrophosphatase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IYX5_DESMD
Zn-finger containing NTP pyrophosphohydrolase
Ig3397_v2_scaffold_1253_16
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14530..15354)
DNA (825bp) protein (275aa)
Beta-ketoadipate enol-lactone hydrolase (EC:3.1.1.24)
Uncharacterized protein n=1 Tax=Enterococcus haemoperoxidus ATCC BAA-382 RepID=R2T0D5_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:CEA14205.1}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum.;"
Ig3397_v2_scaffold_1253_17
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15411..16649)
DNA (1239bp) protein (413aa)
Putative membrane protein n=1 Tax=Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) RepID=D3V9H7_XENNA
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBJ91527.1}; TaxID=406817 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 /; NCIB 9965 / AN6).;"
Ig3397_v2_scaffold_1253_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16646..17725)
DNA (1080bp) protein (360aa)
Oxidoreductase, FAD/FMN-binding n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6I5_CLOPF
Oxidoreductase, FAD/FMN-binding {ECO:0000313|EMBL:EDT24138.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
FAD/FMN-binding oxidoreductase
Ig3397_v2_scaffold_1253_19
unknown

Not on your lists

18153..18701
DNA (549bp) protein (183aa)

This feature has no annotations

Ig3397_v2_scaffold_1253_20
unknown

Not on your lists

comp(18756..19223)
DNA (468bp) protein (156aa)

This feature has no annotations

Ig3397_v2_scaffold_1253_21
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19724..19894
DNA (171bp) protein (57aa)
Sec-independent protein translocase protein TatA n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NLQ0_MARHT
Sec-independent protein translocase tatA/E-like protein; K03116 sec-independent protein translocase protein TatA
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
Ig3397_v2_scaffold_1253_22
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

Not on your lists

19891..20607
DNA (717bp) protein (239aa)
Twin arginine-targeting protein translocase TatC id=2684287 bin=GWF1_Spirochaetes_51_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Sec-independent protein translocase, TatC subunit; K03118 sec-independent protein translocase protein TatC
Tax=GWF1_Spirochaetes_51_8_curated
Ig3397_v2_scaffold_1253_23
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20668..21300
DNA (633bp) protein (211aa)
Uncharacterized protein id=4303203 bin=GWF2_Bacteroidetes_33_16 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
Displaying 23 items

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