ggKbase home page

Ig3397_v2_scaffold_1364

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1364_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

2..520
DNA (519bp) protein (173aa)
Flagellar filament outer layer protein FlaA id=3731186 bin=GWB1_CP_36_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
flagellar filament outer layer protein FlaA-2
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1364_2
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

818..1957
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMT39007.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EMT39007.1};; TaxID=1198630 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter thermohydrosulfuricus WC1.;"
Acyl-CoA dehydrogenase n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8DG40_THETY
acyl-CoA dehydrogenase domain-containing protein
Ig3397_v2_scaffold_1364_3
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1976..2794
DNA (819bp) protein (273aa)
Electron transfer flavoprotein subunit beta n=3 Tax=Clostridium acetobutylicum RepID=ETFB_CLOAB rbh
etfB; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit rbh
Electron transfer flavoprotein subunit beta; Short=Beta-ETF;; Electron transfer flavoprotein small subunit; Short=ETFSS;; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
Ig3397_v2_scaffold_1364_4
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2806..3795
DNA (990bp) protein (330aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8CPD4_THETY rbh
electron transfer flavoprotein subunit alpha/beta; K03522 electron transfer flavoprotein alpha subunit rbh
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:EMT39010.1}; TaxID=1198630 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter thermohydrosulfuricus WC1.;"
Ig3397_v2_scaffold_1364_5
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3812..4240
DNA (429bp) protein (143aa)
MaoC domain protein dehydratase n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DM08_HALPG
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADO76267.1}; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL).;"
Ig3397_v2_scaffold_1364_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

4560..6155
DNA (1596bp) protein (532aa)
id=2797076 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1364_7
unknown

Not on your lists

6375..6737
DNA (363bp) protein (121aa)

This feature has no annotations

Ig3397_v2_scaffold_1364_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

6788..7555
DNA (768bp) protein (256aa)
Dihydropteroate synthase, putative id=2797072 bin=GWB1_CP_36_13 species=Aciduliprofundum boonei genus=Aciduliprofundum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
dihydropteroate synthase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1364_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7700..8488)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037F8DC5
Uncharacterized protein {ECO:0000313|EMBL:AEI47624.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
hypothetical protein
Ig3397_v2_scaffold_1364_10
unknown

Not on your lists

8595..9371
DNA (777bp) protein (259aa)

This feature has no annotations

Ig3397_v2_scaffold_1364_11
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9652..12870
DNA (3219bp) protein (1073aa)
fibronectin type III domain-containing protein
Fibronectin type III domain protein id=2612543 bin=GWB1_CP_36_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWC2_Geobacteraceae_58_44_curated
Ig3397_v2_scaffold_1364_trna_1
unknown

Not on your lists

13079..13151
DNA (73bp)
transferRNA
Ig3397_v2_scaffold_1364_12
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(13579..13875)
DNA (297bp) protein (99aa)
RNP-1 like RNA-binding protein id=2700170 bin=GWC1_Spirochaetes_27_15 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
RNP-1 like RNA-binding protein
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1364_13
unknown

Not on your lists

comp(14199..15878)
DNA (1680bp) protein (560aa)

This feature has no annotations

Ig3397_v2_scaffold_1364_14
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

16492..17628
DNA (1137bp) protein (379aa)
Flagellar biosynthetic protein FlhB id=3707098 bin=GWB1_CP_36_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1364_15
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

17833..18447
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1F2F5_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD33070.1, ECO:0000313|EnsemblProtists:EOD33070}; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emiliania huxleyi CCMP1516.;"
hypothetical protein
Ig3397_v2_scaffold_1364_16
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

18657..19445
DNA (789bp) protein (263aa)
Uncharacterized protein id=3556382 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1364_17
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(19429..19875)
DNA (447bp) protein (149aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase id=3707117 bin=GWB1_CP_36_13 species=Sulfurihydrogenibium azorense genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 18 items

View Taxonomy