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Ig3397_v2_scaffold_1447

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1447_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(51..356)
DNA (306bp) protein (102aa)
Anti-sigma-factor antagonist id=4058633 bin=GWB1_CP_36_13 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1447_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(376..2376)
DNA (2001bp) protein (667aa)
Putative uncharacterized protein id=3471285 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1447_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2514..4121
DNA (1608bp) protein (536aa)
Transcriptional regulator n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASN9_9CLOT rbh
Transcriptional regulator {ECO:0000313|EMBL:EOD00178.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
PAS modulated Fis family sigma-54-specific transcriptional regulator rbh
Ig3397_v2_scaffold_1447_4
unknown

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4381..5133
DNA (753bp) protein (251aa)

This feature has no annotations

Ig3397_v2_scaffold_1447_5
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

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5784..6614
DNA (831bp) protein (277aa)
OmpA/MotB domain protein id=3406338 bin=GWC2_Pelobacter_58_13 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
OmpA/MotB domain-containing protein
Tax=RBG_13_Bacteroidetes_43_22_curated
Ig3397_v2_scaffold_1447_6
Pediculus humanus, Pediculus, Phthiraptera, Neoptera, Arthropoda, Metazoa

Not on your lists

6627..8378
DNA (1752bp) protein (584aa)
Metalloendopeptidase {ECO:0000256|RuleBase:RU361183}; EC=3.4.24.- {ECO:0000256|RuleBase:RU361183};; TaxID=121224 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Phthiraptera; Anoplura; Pediculidae; Pediculus.;" source="Pediculus humanus subsp. corporis (Body louse).;"
Putative uncharacterized protein n=1 Tax=Pediculus humanus subsp. corporis RepID=E0W173_PEDHC
hypothetical protein
Ig3397_v2_scaffold_1447_7
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

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8911..9852
DNA (942bp) protein (314aa)
Two-component system regulator n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LPT1_9SPIR
Two-component system regulator {ECO:0000313|EMBL:CCY75046.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
two-component system regulator
Ig3397_v2_scaffold_1447_8
unknown

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10051..10446
DNA (396bp) protein (132aa)

This feature has no annotations

Ig3397_v2_scaffold_1447_9
unknown

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10465..11016
DNA (552bp) protein (184aa)

This feature has no annotations

Ig3397_v2_scaffold_1447_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

11290..12936
DNA (1647bp) protein (549aa)
Efflux transporter, RND family, MFP subunit id=3272065 bin=GWB1_CP_36_13 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
RND family efflux transporter MFP subunit
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1447_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

12941..16096
DNA (3156bp) protein (1052aa)
Acriflavin resistance protein id=3272064 bin=GWB1_CP_36_13 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1447_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

16109..16483
DNA (375bp) protein (125aa)
id=3852240 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1447_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

16480..17124
DNA (645bp) protein (215aa)
TetR family transcriptional regulator id=3272066 bin=GWB1_CP_36_13 species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
transcriptional regulator, TetR family
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1447_14
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

17137..18582
DNA (1446bp) protein (482aa)
Outer membrane protein-like protein id=3852241 bin=GWB1_CP_36_13 species=Prosthecochloris aestuarii genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
tolC; outer membrane efflux protein
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 14 items

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