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Ig3397_v2_scaffold_1509

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1509_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(3..845)
DNA (843bp) protein (281aa)
tgt-1; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase id=4006059 bin=GWB1_CP_36_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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1003..1788
DNA (786bp) protein (262aa)
hypothetical protein; K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220]
tRNA (Adenine-N(1)-)-methyltransferase id=3419369 bin=GWB1_CP_36_13 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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1822..2943
DNA (1122bp) protein (374aa)
Putative uncharacterized protein id=3758280 bin=GWB1_CP_36_13 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

2949..4004
DNA (1056bp) protein (352aa)
Probable dual-specificity RNA methyltransferase RlmN id=3419368 bin=GWB1_CP_36_13 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(4064..5089)
DNA (1026bp) protein (342aa)
Aminodeoxychorismate lyase id=3731218 bin=GWB1_CP_36_13 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
aminodeoxychorismate lyase; K07082 UPF0755 protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(5062..6678)
DNA (1617bp) protein (539aa)
CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2]
CTP synthase id=3694781 bin=GWB1_CP_36_13 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(6857..8377)
DNA (1521bp) protein (507aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=3694784 bin=GWB1_CP_36_13 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_8
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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comp(8806..10257)
DNA (1452bp) protein (484aa)
Trk system potassium transporter TrkH n=1 Tax=Geovibrio thiophilus RepID=UPI0003B67FAC rbh
K+ transport (Trk) system membrane component; K03498 trk system potassium uptake protein TrkH rbh
K+ transport (Trk) system, membrane component {ECO:0000313|EMBL:BAI80998.1}; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC; 101012 / SSM1).;"
Ig3397_v2_scaffold_1509_9
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10260..11612)
DNA (1353bp) protein (451aa)
TrkA-N domain protein n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H732_DENA2 rbh
TrkA-N domain-containing protein; K03499 trk system potassium uptake protein TrkA rbh
Tax=BJP_IG2069_Spirochaetales_48_31
Ig3397_v2_scaffold_1509_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(11736..12077)
DNA (342bp) protein (114aa)
Single-stranded DNA-binding protein id=4058702 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
single-strand binding protein; K03111 single-strand DNA-binding protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_11
unknown

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12170..12892
DNA (723bp) protein (241aa)

This feature has no annotations

Ig3397_v2_scaffold_1509_12
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

12972..15395
DNA (2424bp) protein (808aa)
Uncharacterized protein id=2742979 bin=GWF1_Spirochaetes_51_8 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Tax=GWF1_Spirochaetes_49_6_curated
Ig3397_v2_scaffold_1509_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

15981..16337
DNA (357bp) protein (119aa)
id=3777611 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_14
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists


16486..16719
DNA (234bp) protein (78aa)
50S ribosomal protein L32 id=3526132 bin=GWB1_CP_36_13 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_15
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

16736..17731
DNA (996bp) protein (332aa)
phosphate acyl-(acyl carrier protein) acyltransferase; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase id=3526133 bin=GWB1_CP_36_13 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1509_16
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

17728..18135
DNA (408bp) protein (136aa)
3-oxoacyl-ACP synthase; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase 3 id=3526134 bin=GWB1_CP_36_13 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
Displaying 16 items

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