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Ig3397_v2_scaffold_1511

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1511_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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1..567
DNA (567bp) protein (189aa)
ABC-type transporter, duplicate ATPase component id=3331197 bin=GWB1_CP_36_13 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1511_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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557..1894
DNA (1338bp) protein (446aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=3331201 bin=GWB1_CP_36_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
two component Fis family sigma54-specific transcriptional regulator
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1511_3
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

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comp(2057..4189)
DNA (2133bp) protein (711aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034940C1
ankyrin repeat protein,protein kinase family protein
Ankyrin repeat protein,protein kinase family protein {ECO:0000313|EMBL:AFZ26487.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
Ig3397_v2_scaffold_1511_4
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

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comp(4338..6428)
DNA (2091bp) protein (697aa)
PREDICTED: hypothetical protein LOC100639010 n=1 Tax=Amphimedon queenslandica RepID=UPI00021A3E3B rbh
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15727881}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
uncharacterized LOC100639010 rbh
Ig3397_v2_scaffold_1511_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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7024..7743
DNA (720bp) protein (240aa)
id=3183871 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1511_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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7740..9143
DNA (1404bp) protein (468aa)
id=3183873 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1511_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(9160..10134)
DNA (975bp) protein (325aa)
Metal-dependent hydrolase id=3703642 bin=GWB1_CP_36_13 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
metal-dependent hydrolase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1511_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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10413..11150
DNA (738bp) protein (246aa)
tRNA 2-thiocytidine biosynthesis protein TtcA id=3703644 bin=GWB1_CP_36_13 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1511_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(11292..12482)
DNA (1191bp) protein (397aa)
sensory histidine kinase AtoS; K07710 two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
Integral membrane sensor signal transduction histidine kinase id=3337887 bin=GWB1_CP_36_13 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1511_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(12482..13366)
DNA (885bp) protein (295aa)
id=3337886 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1511_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13534..13767)
DNA (234bp) protein (78aa)
Acyl carrier protein n=7 Tax=Clostridium thermocellum RepID=ACP_CLOTH
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
acyl carrier protein; K02078 acyl carrier protein
Ig3397_v2_scaffold_1511_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(13920..15113)
DNA (1194bp) protein (398aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase id=3858821 bin=GWB1_CP_36_13 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1511_13
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15400..16029
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6ET07_9BACT
hypothetical protein
Tax=BJP_IG2102_Flavobacteriales_34_12
Ig3397_v2_scaffold_1511_14
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16084..17712)
DNA (1629bp) protein (543aa)
Amidohydrolase 3 n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PST4_MURRD rbh
amidohydrolase; K07047 rbh
Tax=BJP_IG2102_Flavobacteriales_34_12
Ig3397_v2_scaffold_1511_15
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17956..18126
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2EAH6_9BACT
Tax=BJP_IG2102_Flavobacteriales_34_12
Displaying 15 items

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