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Ig3397_v2_scaffold_1588

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1588_1
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..274)
DNA (273bp) protein (91aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0R9U5_9DELT
Response regulator receiver modulated metal dependent phosphohydrolase
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:CCO23553.1}; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio hydrothermalis AM13 = DSM 14728.;"
Ig3397_v2_scaffold_1588_2
Gracilibacillus boraciitolerans, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(407..670)
DNA (264bp) protein (88aa)
FlhB domain protein n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=B2V903_SULSY
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:GAE91646.1}; TaxID=1298598 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus boraciitolerans JCM 21714.;"
FlhB domain-containing protein; K04061 flagellar biosynthesis protein
Ig3397_v2_scaffold_1588_3
unknown

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comp(657..1421)
DNA (765bp) protein (255aa)

This feature has no annotations

Ig3397_v2_scaffold_1588_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(1418..2032)
DNA (615bp) protein (205aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease HII id=2617535 bin=GWB1_CP_36_13 species=Methylophaga thiooxydans genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(2036..2656)
DNA (621bp) protein (207aa)
non-canonical purine NTP pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
Non-canonical purine NTP pyrophosphatase id=2617534 bin=GWB1_CP_36_13 species=Lactobacillus ruminis genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

2992..4986
DNA (1995bp) protein (665aa)
Sigma factor regulatory protein, FecR/PupR family id=3372298 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
LipL45-like lipoprotein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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5304..6188
DNA (885bp) protein (295aa)
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) id=3987547 bin=GWB1_CP_36_13 species=Mesotoga sp. PhosAc3 genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
amino acid/amide ABC transporter membrane protein 1, HAAT family
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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6201..7223
DNA (1023bp) protein (341aa)
ABC-type transporter, integral membrane subunit id=3987549 bin=GWB1_CP_36_13 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

7223..7990
DNA (768bp) protein (256aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family id=3987551 bin=GWB1_CP_36_13 species=unknown genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

7977..8690
DNA (714bp) protein (238aa)
LivF id=3987553 bin=GWB1_CP_36_13 species=Clostridium kluyveri genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

8794..10050
DNA (1257bp) protein (419aa)
ABC transporter substrate-binding protein id=3987555 bin=GWB1_CP_36_13 species=Mesotoga sp. PhosAc3 genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

10192..11862
DNA (1671bp) protein (557aa)
id=3708057 bin=GWB1_CP_36_13 species=Candidatus Desulfamplus magnetomortis genus=Candidatus Desulfamplus taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(11909..12436)
DNA (528bp) protein (176aa)
Hypothetical exported protein id=3072653 bin=GWB1_CP_36_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_14
unknown

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comp(12493..12747)
DNA (255bp) protein (85aa)

This feature has no annotations

Ig3397_v2_scaffold_1588_15
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(12737..13249)
DNA (513bp) protein (171aa)
RNA polymerase sigma-E factor id=3072648 bin=GWB1_CP_36_13 species=Fusobacterium mortiferum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
rpoE2; RNA polymerase sigma-E factor (sigma24) RpoE2
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1588_16
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

13603..15387
DNA (1785bp) protein (595aa)
von Willebrand factor type A n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRG7_9BACT rbh
von Willebrand factor type A rbh
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
Ig3397_v2_scaffold_1588_17
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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15794..16684
DNA (891bp) protein (297aa)
Electron transfer flavoprotein alpha/beta-subunit id=3844891 bin=GWB1_CP_36_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
electron transfer flavoprotein subunit beta rbh
Tax=GWF2_Lentisphaerae_44_16_curated
Ig3397_v2_scaffold_1588_18
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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16695..17375
DNA (681bp) protein (227aa)
Electron transfer flavoprotein, alpha subunit/FixB family protein id=3844892 bin=GWB1_CP_36_13 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
electron transfer flavoprotein subunit alpha/beta; K03522 electron transfer flavoprotein alpha subunit
Tax=GWF2_Lentisphaerae_52_8_curated
Displaying 18 items

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