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Ig3397_v2_scaffold_1734

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1734_1
unknown

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comp(1..153)
DNA (153bp) protein (51aa)

This feature has no annotations

Ig3397_v2_scaffold_1734_2
unknown

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201..881
DNA (681bp) protein (227aa)

This feature has no annotations

Ig3397_v2_scaffold_1734_3
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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909..1382
DNA (474bp) protein (158aa)
alkyl hydroperoxide reductase; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FF80_DESAA
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACL03897.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
Ig3397_v2_scaffold_1734_4
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1391..1945
DNA (555bp) protein (185aa)
LOG family protein PA4923 n=1 Tax=Pseudomonas pelagia RepID=UPI0003A444C6
LOG family protein {ECO:0000313|EMBL:AIB12761.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
hypothetical protein
Ig3397_v2_scaffold_1734_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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2039..3763
DNA (1725bp) protein (575aa)
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
Ribonuclease R id=2650103 bin=GWB1_CP_36_13 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1734_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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3767..4876
DNA (1110bp) protein (370aa)
glutamate 5-kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11]
Glutamate 5-kinase id=3218241 bin=GWB1_CP_36_13 species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1734_7
Treponema pedis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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4902..5102
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Treponema pedis str. T A4 RepID=S5ZL09_9SPIO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT43257.1}; TaxID=1291379 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema pedis str. T A4.;"
Ig3397_v2_scaffold_1734_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

5165..6352
DNA (1188bp) protein (396aa)
glycine C-acetyltransferase (EC:2.3.1.29)
Serine hydroxymethyltransferase id=3218320 bin=GWB1_CP_36_13 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1734_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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6479..7171
DNA (693bp) protein (231aa)
id=3218325 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1734_10
Leptospira meyeri, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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7590..8600
DNA (1011bp) protein (337aa)
Rod shape-determining protein MreB id=3817532 bin=GWB1_CP_36_13 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:EMJ88906.1}; TaxID=1218585 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira meyeri serovar Semaranga str. Veldrot Semarang 173.;"
Ig3397_v2_scaffold_1734_11
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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8675..9451
DNA (777bp) protein (259aa)
Cell shape-determining protein MreC id=3817533 bin=GWB1_CP_36_13 species=Treponema sp. JC4 genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Tax=BJP_IG2069_Spirochaetales_48_31
Ig3397_v2_scaffold_1734_12
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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9448..9936
DNA (489bp) protein (163aa)
Rod shape-determining protein MreD id=3817534 bin=GWB1_CP_36_13 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
rod shape-determining protein MreD; K03571 rod shape-determining protein MreD
Tax=RBG_16_Spirochaete_67_19_curated
Ig3397_v2_scaffold_1734_13
Brachyspira intermedia, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9936..11789
DNA (1854bp) protein (618aa)
Peptidoglycan synthesis penicillin-binding protein 0 id=3817535 bin=GWB1_CP_36_13 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
pbp1; transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2); K05515 penicillin-binding protein 2 rbh
Transpeptidase involved in peptidoglycan synthesis (Penicillin-binding protein 2) {ECO:0000313|EMBL:AEM22465.1}; TaxID=1045858 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira intermedia (strain ATCC 51140 / PWS/A) (Serpulina; intermedia).;"
Ig3397_v2_scaffold_1734_14
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11786..13099
DNA (1314bp) protein (438aa)
Cell cycle protein id=3817536 bin=GWB1_CP_36_13 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
mrdB; rod shape-determining protein RodA; K05837 rod shape determining protein RodA
Tax=BJP_IG2069_Spirochaetales_48_31
Ig3397_v2_scaffold_1734_15
unknown

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13205..13873
DNA (669bp) protein (223aa)
id=3817537 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Ig3397_v2_scaffold_1734_16
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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13997..15301
DNA (1305bp) protein (435aa)
PLD6; phospholipase D family, member 6 (EC:3.1.4.4)
Phospholipase D/Transphosphatidylase id=2622831 bin=GWB1_CP_36_13 species=Ixodes scapularis genus=Ixodes taxon_order=Ixodida taxon_class=Arachnida phylum=Arthropoda tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1734_17
unknown

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15298..16185
DNA (888bp) protein (296aa)

This feature has no annotations

Displaying 17 items

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