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Ig3397_v2_scaffold_1761

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1761_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(3..410)
DNA (408bp) protein (136aa)
ATP-dependent Clp protease proteolytic subunit id=3263630 bin=GWB1_CP_36_13 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
clpP1; peptidase S14, ClpP
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(410..1720)
DNA (1311bp) protein (437aa)
Trigger factor id=3263627 bin=GWB1_CP_36_13 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
trigger factor; K03545 trigger factor
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(1825..3213)
DNA (1389bp) protein (463aa)
multi-sensor hybrid histidine kinase id=3331328 bin=GWB1_CP_36_13 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
response regulator receiver modulated serine phosphatase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(3216..4037)
DNA (822bp) protein (274aa)
id=3331251 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(4041..5441)
DNA (1401bp) protein (467aa)
TPR domain protein id=3331248 bin=GWB1_CP_36_13 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(5459..6475)
DNA (1017bp) protein (339aa)
ESTERASE/LIPASE 1 id=3331244 bin=GWB1_CP_36_13 species=Mycoplasma pulmonis genus=Mycoplasma taxon_order=Mycoplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
alpha/beta hydrolase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(6472..7437)
DNA (966bp) protein (322aa)
id=3331242 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(7424..8212)
DNA (789bp) protein (263aa)
Lipid kinase, YegS/Rv2252/BmrU family id=3331237 bin=GWB1_CP_36_13 species=unknown genus=Anaerostipes taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein; K07029
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(8220..9056)
DNA (837bp) protein (279aa)
DNA repair protein RecO id=3331235 bin=GWB1_CP_36_13 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
putative DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(9081..11576)
DNA (2496bp) protein (832aa)
Putative ATP-dependent Clp protease ATP-binding subunit id=3247166 bin=GWB1_CP_36_13 species=Actinoplanes missouriensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

11858..13360
DNA (1503bp) protein (501aa)
ABC transporter, ATP-binding protein id=3679472 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
uup; ABC transporter ATPase rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1761_12
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13375..14655
DNA (1281bp) protein (427aa)
Sugar phosphate permease id=2471451 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
sugar phosphate permease rbh
Tax=BJP_IG2069_Spirochaetales_48_31
Ig3397_v2_scaffold_1761_13
unknown

Not on your lists

comp(14635..14886)
DNA (252bp) protein (84aa)

This feature has no annotations

Ig3397_v2_scaffold_1761_14
GWA2_WS6_37_6, WS6, Bacteria

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comp(15131..15991)
DNA (861bp) protein (287aa)
RHS repeat-associated core domain-containing protein id=5102320 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
YD repeat protein {ECO:0000313|EMBL:KKQ34810.1}; TaxID=1619087 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
RHS repeat-associated core domain protein
Displaying 14 items

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