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Ig3397_v2_scaffold_1874

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1874_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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3..764
DNA (762bp) protein (254aa)
Putative inhibitor of MCP methylation, CheC id=3533768 bin=GWB1_CP_36_13 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1874_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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898..2643
DNA (1746bp) protein (582aa)
DNA/RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] rbh
DNA/RNA helicase, superfamily II id=3707108 bin=GWB1_CP_36_13 species=Marinitoga piezophila genus=Marinitoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1874_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2643..4478
DNA (1836bp) protein (612aa)
GTP-binding protein TypA id=1802760 bin=GWD2_RBX1-related_39_127 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17 rbh
GTP-binding protein TypA/BipA rbh
Tax=GWF2_RBX1_38_17_curated
Ig3397_v2_scaffold_1874_4
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

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comp(4486..6222)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3HHZ7_STRPU
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_001249-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
ankyrin repeat protein
Ig3397_v2_scaffold_1874_5
unknown

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comp(6251..6643)
DNA (393bp) protein (131aa)

This feature has no annotations

Ig3397_v2_scaffold_1874_6
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(6767..8287)
DNA (1521bp) protein (507aa)
AAA+ family ATPase n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GHT5_9CYAN rbh
ATPase AAA rbh
Tax=BJP_IG2069_Spirochaetales_48_31
Ig3397_v2_scaffold_1874_7
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8669..9736
DNA (1068bp) protein (356aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
rsgA2; RsgA2; K06949 ribosome biogenesis GTPase [EC:3.6.1.-]
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Paenibacillus lactis 154 RepID=G4HCJ1_9BACL
Ig3397_v2_scaffold_1874_8
unknown

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comp(9744..10499)
DNA (756bp) protein (252aa)

This feature has no annotations

Ig3397_v2_scaffold_1874_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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10616..11179
DNA (564bp) protein (188aa)
DnaJ domain protein id=2926315 bin=GWB1_CP_36_13 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
heat shock protein DnaJ domain-containing protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1874_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

11197..11616
DNA (420bp) protein (140aa)
Flagellar FliL protein id=3331364 bin=GWB1_CP_36_13 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1874_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(11621..13183)
DNA (1563bp) protein (521aa)
TPR Domain containing protein id=3767363 bin=GWB1_CP_36_13 species=Tetrahymena thermophila genus=Tetrahymena taxon_order=Hymenostomatida taxon_class=Oligohymenophorea phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
putative TPR domain-containing protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1874_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(13341..15056)
DNA (1716bp) protein (572aa)
hypothetical protein PJC66_15721 id=3072665 bin=GWB1_CP_36_13 species=Paenibacillus popilliae genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
capsule synthesis protein CapA; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein)
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 12 items

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