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Ig3397_v2_scaffold_1918

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1918_1
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

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102..1286
DNA (1185bp) protein (395aa)
NADH oxidase (EC:1.-.-.-)
NADH oxidase id=2248232 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
Ig3397_v2_scaffold_1918_2
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

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1376..2425
DNA (1050bp) protein (350aa)
OmpA/MotB domain protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8U0_SPISS
OmpA/MotB domain-containing protein
Tax=RBG_16_Spirochaetes_49_21_curated
Ig3397_v2_scaffold_1918_3
Raphidiopsis brookii, Raphidiopsis, Nostocales, Cyanobacteria, Bacteria

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comp(2476..3393)
DNA (918bp) protein (306aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=533247 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Raphidiopsis.;" source="Raphidiopsis brookii D9.;"
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000380BC6C
integral membrane sensor signal transduction histidine kinase
Ig3397_v2_scaffold_1918_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(3429..4139)
DNA (711bp) protein (237aa)
Serine/threonine protein kinase id=2670629 bin=GWB1_CP_36_13 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1918_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(4157..5551)
DNA (1395bp) protein (465aa)
Extracellular solute-binding protein family 1 id=2670634 bin=GWB1_CP_36_13 species=Geobacillus thermoglucosidasius genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1918_6
unknown

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comp(5590..6384)
DNA (795bp) protein (265aa)

This feature has no annotations

Ig3397_v2_scaffold_1918_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(6586..7293)
DNA (708bp) protein (236aa)
Hypothetical conserved protein id=3331523 bin=GWB1_CP_36_13 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Putative PolB-like 3'-5' exonuclease; K07501 hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1918_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(7295..8923)
DNA (1629bp) protein (543aa)
N-methylhydantoinase id=3331521 bin=GWB1_CP_36_13 species=Oxalobacter formigenes genus=Oxalobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
HyuA; N-methylhydaintoinase A
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1918_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(8938..10290)
DNA (1353bp) protein (451aa)
RNA polymerase sigma factor id=3331519 bin=GWB1_CP_36_13 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
RpoD family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1918_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(10548..11168)
DNA (621bp) protein (207aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G id=3331517 bin=GWB1_CP_36_13 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1918_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(11184..13103)
DNA (1920bp) protein (640aa)
Serine/threonine protein kinase id=2622897 bin=GWB1_CP_36_13 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
protein serine/threonine phosphatase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1918_12
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(13114..14151)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein id=2883680 bin=GWC1_Spirochaetes_27_15 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
putative RNA nucleotidyltransferase
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1918_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

14353..14682
DNA (330bp) protein (110aa)
id=3331356 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 13 items

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