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Ig3397_v2_scaffold_1924

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1924_1
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
pyc; pyruvate carboxylase Pyc (EC:6.4.1.1)
Pyruvate carboxylase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPX7_9CLOT
Ig3397_v2_scaffold_1924_2
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(421..900)
DNA (480bp) protein (160aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (str
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KMZ0_ARCVS
Ig3397_v2_scaffold_1924_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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1144..1692
DNA (549bp) protein (183aa)
MerR family transcriptional regulator id=3951579 bin=GWC2_Bacteroidetes_46_850 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
MerR family transcriptional regulator
Tax=GWC2_Bacteroidetes_46_850_curated
Ig3397_v2_scaffold_1924_4
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1852..3594)
DNA (1743bp) protein (581aa)
Histone deacetylase superfamily id=4155337 bin=GWF2_Lentisphaerae_52_8 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
deacetylase, histone deacetylase/acetoin utilization protein
Tax=CG_Desulfarul_01
Ig3397_v2_scaffold_1924_5
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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comp(4193..5002)
DNA (810bp) protein (270aa)
Putative uncharacterized protein id=3568284 bin=GWC1_Spirochaetes_27_15 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1924_6
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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comp(5004..5696)
DNA (693bp) protein (231aa)
TrkA-N domain protein id=3568282 bin=GWC1_Spirochaetes_27_15 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
TrkA-N domain-containing protein; K03499 trk system potassium uptake protein TrkA
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1924_7
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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comp(5719..7458)
DNA (1740bp) protein (580aa)
TrkH family potassium uptake protein (EC:3.6.3.14) rbh
Potassium uptake protein, TrkH family id=3568280 bin=GWC1_Spirochaetes_27_15 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes rbh
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1924_8
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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7835..11317
DNA (3483bp) protein (1161aa)
PAS sensor protein; K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PAS sensor protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3N2_NITHN
Ig3397_v2_scaffold_1924_9
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11457..12071)
DNA (615bp) protein (205aa)
Rhomboid family protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GSM4_9SPHI
Rhomboid family protein {ECO:0000313|EMBL:EOR94867.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
rhomboid family protein
Ig3397_v2_scaffold_1924_10
unknown

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12335..12478
DNA (144bp) protein (48aa)

This feature has no annotations

Ig3397_v2_scaffold_1924_11
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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12564..14756
DNA (2193bp) protein (731aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACV34322.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ACV34322.1};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Multi-sensor hybrid histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPS9_ACCPU
Displaying 11 items

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