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Ig3397_v2_scaffold_1980

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1980_1
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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3..173
DNA (171bp) protein (57aa)
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1980_2
Borrelia hermsii, Borrelia, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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294..1178
DNA (885bp) protein (295aa)
chemotaxis protein methyltransferase (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
Chemotaxis protein methyltransferase {ECO:0000313|EMBL:AHH13544.1}; EC=2.1.1.80 {ECO:0000313|EMBL:AHH13544.1};; TaxID=1313291 species="Bacteria; Spirochaetes; Spirochaetales; Borreliaceae; Borrelia.;" source="Borrelia hermsii MTW.;"
Chemotaxis protein methyltransferase n=1 Tax=Borrelia hermsii (strain HS1 / DAH) RepID=B2S1M8_BORHD
Ig3397_v2_scaffold_1980_3
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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1186..2250
DNA (1065bp) protein (355aa)
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] rbh
Chemotaxis response regulator protein-glutamate methylesterase id=2767825 bin=GWC1_Spirochaetes_27_15 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes rbh
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1980_4
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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2256..3587
DNA (1332bp) protein (444aa)
Methyl-accepting chemotaxis protein id=3713968 bin=GWB1_CP_36_13 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
methyl-accepting chemotaxis sensory transducer
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1980_5
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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3615..3974
DNA (360bp) protein (120aa)
Response regulator receiver protein id=2499650 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
chemotaxis protein CheY; K03413 two-component system, chemotaxis family, response regulator CheY
Tax=GWD1_Spirochaetes_27_9_curated
Ig3397_v2_scaffold_1980_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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3993..7610
DNA (3618bp) protein (1206aa)
Multi-sensor signal transduction histidine kinase id=2921659 bin=GWB1_CP_36_13 species=Pseudanabaena biceps genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
PAS sensor protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1980_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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7705..9135
DNA (1431bp) protein (477aa)
Sigma-54 factor interaction domain-containing protein id=3714056 bin=GWB1_CP_36_13 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
sigma-54 factor interaction domain-containing protein rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_1980_8
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(9141..9782)
DNA (642bp) protein (214aa)
Flagellar protein B id=3194851 bin=GWB1_CP_36_13 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
flagellar protein
Tax=BJP_IG2069_Spirochaetales_48_31
Ig3397_v2_scaffold_1980_9
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

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comp(9779..10045)
DNA (267bp) protein (89aa)
Carbon storage regulator homolog id=3194854 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
csrA; carbon storage regulator; K03563 carbon storage regulator
Tax=RBG_13_Spirochaetes_51_14_curated
Ig3397_v2_scaffold_1980_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10029..10514)
DNA (486bp) protein (162aa)
Flagellar assembly factor FliW id=3194857 bin=GWB1_CP_36_13 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
flagellar assembly factor fliW; K13626 flagellar assembly factor FliW
Ig3397_v2_scaffold_1980_11
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(10575..11843)
DNA (1269bp) protein (423aa)
Flagellar hook-associated protein 3 id=3194860 bin=GWB1_CP_36_13 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
flgL; flagellar hook-associated protein FlgL; K02397 flagellar hook-associated protein 3 FlgL
Tax=BJP_IG2069_Spirochaetales_48_31
Ig3397_v2_scaffold_1980_12
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

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comp(11863..13806)
DNA (1944bp) protein (648aa)
Flagellar hook-associated protein FlgK id=3194863 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
flgK; flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK
Tax=GWE2_Spirochaetes_31_10_curated
Ig3397_v2_scaffold_1980_13
unknown

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comp(13828..14319)
DNA (492bp) protein (164aa)
id=3194866 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Displaying 13 items

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