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Ig3397_v2_scaffold_5220

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_5220_1
unknown

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comp(2..238)
DNA (237bp) protein (79aa)

This feature has no annotations

Ig3397_v2_scaffold_5220_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(486..1025)
DNA (540bp) protein (180aa)
ruvA; Holliday junction DNA helicase RuvA (EC:3.6.4.12); K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
holliday junction DNA helicase RuvA id=3034221 bin=GWB1_CP_36_13 species=gamma proteobacterium SCGC AAA007-O20 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_5220_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(1064..1669)
DNA (606bp) protein (202aa)
Bifunctional nuclease id=3034224 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein; K08999 hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_5220_4
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1945..2688)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RB12_CELLC
Uncharacterized protein {ECO:0000313|EMBL:EWH14856.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
hypothetical protein
Ig3397_v2_scaffold_5220_5
Acinetobacter junii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3450..3743)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Acinetobacter junii RepID=N9B798_ACIJU
Mobile element protein {ECO:0000313|EMBL:EPR86845.1}; TaxID=1330047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter junii MTCC 11364.;"
ISDet4, transposase
Ig3397_v2_scaffold_5220_6
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3983..4861
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RY52_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK88131.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein rbh
Ig3397_v2_scaffold_5220_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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4982..6628
DNA (1647bp) protein (549aa)
Methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Homocysteine S-methyltransferase/B12 binding domain/Pterin binding enzyme id=3331090 bin=GWB1_CP_36_13 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 7 items

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