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Ig3397_v2_scaffold_3024

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_3024_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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3..383
DNA (381bp) protein (127aa)
Flagellar basal-body rod protein FlgF id=3749390 bin=GWB1_CP_36_13 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
flagellar basal-body rod protein FlgF; K02392 flagellar basal-body rod protein FlgG
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3024_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(438..779)
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II id=4006154 bin=GWB1_CP_36_13 species=Nitratifractor salsuginis genus=Nitratifractor taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
nitrogen regulatory protein PII; K04751 nitrogen regulatory protein P-II 1
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3024_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(801..1997)
DNA (1197bp) protein (399aa)
Ammonium/methylammonium permease id=4006156 bin=GWB1_CP_36_13 species=unknown genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
ammonium transporter
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3024_4
unknown

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2326..2718
DNA (393bp) protein (131aa)

This feature has no annotations

Ig3397_v2_scaffold_3024_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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2758..3690
DNA (933bp) protein (311aa)
Response regulator receiver domain / GHKL domain multi-domain protein id=3713963 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3024_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(3928..4383)
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=3823923 bin=GWB1_CP_36_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3024_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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4714..5550
DNA (837bp) protein (279aa)
Putative pyruvate, phosphate dikinase regulatory protein id=3823921 bin=GWB1_CP_36_13 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein; K09773 hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3024_8
candidate division Zixibacteria, Bacteria

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5547..6128
DNA (582bp) protein (194aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0003115ABB
Ig3397_v2_scaffold_3024_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

6168..6443
DNA (276bp) protein (92aa)
id=3823918 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3024_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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6689..9013
DNA (2325bp) protein (775aa)
Chromosome partition protein Smc id=3096343 bin=GWB1_CP_36_13 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
chromosome segregation protein SMC; K03529 chromosome segregation protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3024_11
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

9182..9460
DNA (279bp) protein (93aa)
Chromosome partition protein Smc id=3096343 bin=GWB1_CP_36_13 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
chromosome segregation protein SMC; K03529 chromosome segregation protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3024_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

9470..9931
DNA (462bp) protein (154aa)
Uncharacterized protein id=3096346 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 12 items

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