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Ig3397_v2_scaffold_3073

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_3073_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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1..1428
DNA (1428bp) protein (476aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase id=3550813 bin=GWB1_CP_36_13 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3073_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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1693..4038
DNA (2346bp) protein (782aa)
spermidine synthase (EC:2.5.1.16)
Putative uncharacterized protein id=3550812 bin=GWB1_CP_36_13 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3073_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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4048..5250
DNA (1203bp) protein (401aa)
Phosphoglycerate kinase id=3550811 bin=GWB1_CP_36_13 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
pgk; Phosphoglycerate kinase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3073_4
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5255..6316)
DNA (1062bp) protein (354aa)
Deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3Q6_THEGP
Tax=BJP_IG2157_Clostridiales_52_13
Ig3397_v2_scaffold_3073_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(6300..6755)
DNA (456bp) protein (152aa)
Putative transcriptional regulator id=3562995 bin=GWB1_CP_36_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
MerR family transcriptional regulator
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3073_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(6808..7527)
DNA (720bp) protein (240aa)
Electron transport complex, RnfABCDGE type, E subunit id=3562997 bin=GWB1_CP_36_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
rnfE; electron transport complex protein, subunit E
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3073_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(7524..8201)
DNA (678bp) protein (226aa)
Electron transport complex, RnfABCDGE type, D subunit id=3562999 bin=GWB1_CP_36_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
rnfG; putative electron transport complex protein RnfG; K03612 electron transport complex protein RnfG
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3073_8
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(8198..9253)
DNA (1056bp) protein (352aa)
Electron transport complex, RnfABCDGE type, D subunit id=1266716 bin=GWE1_Spirochaetes_32_154 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes
RnfABCDGE type electron transport complex subunit D; K03614 electron transport complex protein RnfD
Tax=RBG_13_WOR_2_41_10_curated
Ig3397_v2_scaffold_3073_9
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(9246..10619)
DNA (1374bp) protein (458aa)
Electron transport complex protein RnfC id=3563001 bin=GWB1_CP_36_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
RnfABCDGE type electron transport complex subunit C; K03615 electron transport complex protein RnfC
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3073_10
Caldithrix abyssi, Caldithrix, Bacteria

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comp(10594..12138)
DNA (1545bp) protein (515aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
leuA; 2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQF2_9BACT
Ig3397_v2_scaffold_3073_11
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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12381..13376
DNA (996bp) protein (332aa)
hypothetical protein id=7202223 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
Ig3397_v2_scaffold_3073_12
RHI_Planctomycetes_42_15, Planctomycetes, Bacteria

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13392..14162
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003754C4A
Indole-3-glycerol phosphate synthase
Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
Ig3397_v2_scaffold_3073_13
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

14146..15405
DNA (1260bp) protein (420aa)
Outer membrane protein, OMP85 family id=3834606 bin=GWB1_CP_36_13 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3073_14
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

15487..16509
DNA (1023bp) protein (341aa)
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (EC:2.6.1.9)
Histidinol-phosphate transaminase id=2553526 bin=GWB1_CP_36_13 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3073_15
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

16506..17309
DNA (804bp) protein (268aa)
CDP-alcohol phosphatidyltransferase id=2553524 bin=GWB1_CP_36_13 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3073_16
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

17313..17558
DNA (246bp) protein (82aa)
Nucleotidyl transferase id=2553521 bin=GWB1_CP_36_13 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Nucleotidyl transferase
Tax=GWB1_Spirochaetes_36_13_curated
Displaying 16 items

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