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Ig3397_v2_scaffold_3129

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_3129_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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1..822
DNA (822bp) protein (274aa)
methionine synthase (B12-dependent) (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Homocysteine S-methyltransferase/B12 binding domain/Pterin binding enzyme id=3331090 bin=GWB1_CP_36_13 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3129_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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876..2237
DNA (1362bp) protein (454aa)
id=3331093 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3129_3
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2263..3018)
DNA (756bp) protein (252aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RVG1_SPHGB
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ADY12953.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Ig3397_v2_scaffold_3129_4
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

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comp(2981..3733)
DNA (753bp) protein (251aa)
TatD related DNase; K03424 TatD DNase family protein [EC:3.1.21.-]
Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=D5A7S4_PICSI
Tax=RifOxyB12_full_OP3_50_7_curated
Ig3397_v2_scaffold_3129_5
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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3818..4984
DNA (1167bp) protein (389aa)
rlmI; ribosomal RNA large subunit methyltransferase I; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] rbh
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R577_9CHLA rbh
Tax=BJP_IG2069_Spirochaetales_48_31
Ig3397_v2_scaffold_3129_6
RIFOXYB2_FULL_Desulfobacula_45_6_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5057..6367
DNA (1311bp) protein (437aa)
isocitrate dehydrogenase (EC:1.1.1.41); K00031 isocitrate dehydrogenase [EC:1.1.1.42] rbh
Probable isocitrate dehydrogenase [NADP] n=1 Tax=uncultured archaeon RepID=D1JG59_9ARCH rbh
Tax=RIFOXYB2_FULL_Desulfobacula_45_6_curated
Ig3397_v2_scaffold_3129_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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6517..7500
DNA (984bp) protein (328aa)
Lipase id=3758610 bin=GWB1_CP_36_13 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
lipase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3129_8
CG_Bacteroid_01, Bacteroidetes, Bacteria

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comp(7853..8419)
DNA (567bp) protein (189aa)
Transposase IS4 family protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SZJ4_9CLOT
transposase IS4 family protein
Tax=CG_Bacteroid_01
Ig3397_v2_scaffold_3129_9
unknown

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8675..9781
DNA (1107bp) protein (369aa)

This feature has no annotations

Displaying 9 items

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