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Ig3397_v2_scaffold_3408

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_3408_1
unknown

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comp(2..1015)
DNA (1014bp) protein (338aa)

This feature has no annotations

Ig3397_v2_scaffold_3408_2
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(1380..3089)
DNA (1710bp) protein (570aa)
Leucine Rich Repeat domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W1Z2_9CYAN
Leucine Rich Repeat domain protein {ECO:0000313|EMBL:EDX71870.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
internalin-A
Ig3397_v2_scaffold_3408_trna_1
unknown

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comp(3187..3260)
DNA (74bp)
transferRNA
Ig3397_v2_scaffold_3408_3
CSP1_5_NC10, NC10, Bacteria

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3366..4115
DNA (750bp) protein (250aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase id=3194841 bin=GWB1_CP_36_13 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=CSP1_5_NC10
Ig3397_v2_scaffold_3408_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(4333..5106)
DNA (774bp) protein (258aa)
Uncharacterized protein id=4005986 bin=GWB1_CP_36_13 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
protein of unknown function DUF140
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3408_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(5103..6458)
DNA (1356bp) protein (452aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase id=4006041 bin=GWB1_CP_36_13 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3408_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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6781..7065
DNA (285bp) protein (95aa)
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=4006048 bin=GWB1_CP_36_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3408_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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7077..7697
DNA (621bp) protein (207aa)
Cyclic nucleotide-binding domain protein id=4006049 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
cAMP-binding protein regulatory protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3408_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

7722..8951
DNA (1230bp) protein (410aa)
SpoOJ/ParA/ParB/repB family protein n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B56E62
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3408_9
unknown

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comp(9019..9207)
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 10 items

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