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Ig3397_v2_scaffold_3775

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_3775_1
BJP_IG2157_CP_49_12, Bacteria

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3..1133
DNA (1131bp) protein (377aa)
ATPase (AAA+ superfamily)-like protein id=3714424 bin=GWA2_OP3_52_12 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors rbh
ATPase (AAA+ superfamily)-like protein; K07133
Tax=BJP_IG2157_CP_49_12
Ig3397_v2_scaffold_3775_2
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1239..2912)
DNA (1674bp) protein (558aa)
2-isopropylmalate synthase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFI8_AZOBR
leuA; 2-isopropylmalate synthase
Tax=BJP_IG2102_Clostridiales_34_350
Ig3397_v2_scaffold_3775_3
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

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3387..4319
DNA (933bp) protein (311aa)
Nod factor export ATP-binding protein I (EC:3.6.3.-); K09695 lipooligosaccharide transport system ATP-binding protein rbh
ABC-type multidrug transport system, ATPase component id=2957825 bin=GWF1_Spirochaetes_51_8 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade rbh
Tax=GWF1_Spirochaetes_51_8_curated
Ig3397_v2_scaffold_3775_4
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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4306..5094
DNA (789bp) protein (263aa)
ABC-type multidrug transport system, permease component id=3920648 bin=GWF2_Planctomycetes_42_9 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes rbh
multidrug ABC transporter permease; K09694 lipooligosaccharide transport system permease protein rbh
Tax=GWF2_Planctomycetes_42_9_curated
Ig3397_v2_scaffold_3775_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(5091..5690)
DNA (600bp) protein (200aa)
hypothetical protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
Uncharacterized protein id=2509990 bin=GWB1_CP_36_13 species=Bacteroides vulgatus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3775_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(5872..7083)
DNA (1212bp) protein (404aa)
hydrolase id=3152756 bin=GWB1_CP_36_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hydrolase; K07023 putative hydrolases of HD superfamily
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3775_7
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7750..8370)
DNA (621bp) protein (207aa)
Methyltransferase-related protein id=2823618 bin=GWF2_Lentisphaerae_50_93 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
methyltransferase-like protein
Tax=BJP_IG2069_Clostridiales_42_11
Displaying 7 items

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