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Ig3397_v2_scaffold_3941

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_3941_1
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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3..551
DNA (549bp) protein (183aa)
3-deoxy-manno-octulosonate cytidylyltransferase id=3852313 bin=GWB1_CP_36_13 species=Waddlia chondrophila genus=Waddlia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
spsF; 3-deoxy-manno-octulosonate cytidylyltransferase
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3941_2
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

611..1231
DNA (621bp) protein (207aa)
lspA; Signal peptidase II; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase id=3331507 bin=GWB1_CP_36_13 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3941_3
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

1235..1639
DNA (405bp) protein (135aa)
id=3331506 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3941_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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1650..3200
DNA (1551bp) protein (517aa)
Integral membrane protein MviN id=3331504 bin=GWB1_CP_36_13 species=Fusobacterium mortiferum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
integral membrane protein MviN; K03980 virulence factor
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3941_5
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(3121..4179)
DNA (1059bp) protein (353aa)
Uncharacterized protein id=3331503 bin=GWB1_CP_36_13 species=Canis lupus genus=Canis taxon_order=Carnivora taxon_class=Mammalia phylum=Chordata tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3941_6
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(4163..5254)
DNA (1092bp) protein (364aa)
TPR domain protein id=3331502 bin=GWB1_CP_36_13 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
hypothetical protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3941_7
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(5387..5842)
DNA (456bp) protein (152aa)
acetyltransferase; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1]
GCN5-related N-acetyltransferase id=3098451 bin=GWB1_CP_36_13 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3941_8
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(5829..6167)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II id=3098450 bin=GWB1_CP_36_13 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
GLNB; P2-like signal transmitter protein GlnB; K04751 nitrogen regulatory protein P-II 1
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3941_9
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(6151..6450)
DNA (300bp) protein (100aa)
Uncharacterized protein involved in tolerance to divalent cations n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C8I0_9CREN
Uncharacterized protein involved in tolerance to divalent cations {ECO:0000313|EMBL:EHP68456.1}; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera yellowstonensis MK1.;"
hypothetical protein; K03926 periplasmic divalent cation tolerance protein
Ig3397_v2_scaffold_3941_10
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(6516..6860)
DNA (345bp) protein (115aa)
DnaK suppressor protein id=2315714 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
DnaK suppressor protein; K06204 DnaK suppressor protein
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3941_11
unknown

Not on your lists

6941..7078
DNA (138bp) protein (46aa)

This feature has no annotations

Ig3397_v2_scaffold_3941_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists


7230..7544
DNA (315bp) protein (105aa)
50S ribosomal protein L21 id=3098448 bin=GWB1_CP_36_13 species=Bacillus thuringiensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
Tax=GWB1_Spirochaetes_36_13_curated
Ig3397_v2_scaffold_3941_13
unknown

Not on your lists

7546..7713
DNA (168bp) protein (56aa)

This feature has no annotations

Ig3397_v2_scaffold_3941_14
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


7866..8120
DNA (255bp) protein (85aa)
50S ribosomal protein L27 n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=RL27_TRIEI
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
50S ribosomal protein L27 {ECO:0000255|HAMAP-Rule:MF_00539}; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium erythraeum (strain IMS101).;"
Displaying 14 items

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