ggKbase home page

Ig3397_v2_scaffold_3483_6

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2464..3000)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 id=3834792 bin=GWB1_CP_36_13 species=Eubacterium hallii genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 178.0
  • Bit_score: 232
  • Evalue 2.70e-58
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 178.0
  • Bit_score: 212
  • Evalue 1.60e-52
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 178.0
  • Bit_score: 232
  • Evalue 3.80e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 537
ATGTCTAAGGTAGGAAGAAAGCCTATTGAGATACCCAAGGGTGTAACAGTCCAGGTAGCAGATAACATGATTAAGGTAAAAGGACCCAAAGGGGAGCTCTCCCAAAGTTATCAGGGAGATATTCAAATAGAAGTCAAGGAAAGTGCCGTACTTCTGGAGCGTGGCGACGATCAGCCTCAAAACAGGGCATATCACGGTCTTTATAGAAGCTTGATAAATAATATGGTTATTGGCGCATCCCAAGGATTTACCAGAGTTTTGGAGCTGATCGGTACGGGATACCGGGCTCAAATGAAAGGCAAGGTACTGAGTCTTTCTCTTGGTTTTTCCCATCCTGTGGAGGTTGAAATACCTTCTTATCTGGAATGCAAGCTCGAAGGGCAAACTAAGATTTTTCTTACAGGGATCAATAAACAACAAGTGGGGCAATTCGCGTCTGATATCCGTGATATCAGGCCTCCTGAGCCATATAAAGGTAAGGGAATTCGCTATGAGGGCGAAGTTGTGCGCAGAAAAGCCGGTAAATCTGCTAAGTAA
PROTEIN sequence
Length: 179
MSKVGRKPIEIPKGVTVQVADNMIKVKGPKGELSQSYQGDIQIEVKESAVLLERGDDQPQNRAYHGLYRSLINNMVIGASQGFTRVLELIGTGYRAQMKGKVLSLSLGFSHPVEVEIPSYLECKLEGQTKIFLTGINKQQVGQFASDIRDIRPPEPYKGKGIRYEGEVVRRKAGKSAK*