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Ig3397_v2_scaffold_3483_10

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(4196..4522)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 id=3834788 bin=GWB1_CP_36_13 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 108.0
  • Bit_score: 136
  • Evalue 1.20e-29
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 108.0
  • Bit_score: 120
  • Evalue 3.80e-25
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 108.0
  • Bit_score: 136
  • Evalue 1.70e-29

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Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 327
GTGAATGGTAAAACCAAGTTAAAGAAGGGTGACCAGGTTGTGGTGACCACGGGAAAAGAGAAGGGAAAGAAAGGCGAAATCTCCGAACTGATTCTTAAAAGAATGCGCGTGCTCATTACCGGCGTAAATGTGGTCAAAAAACACAAAAAGAGCCAATCAGAGAATAAGAAACCCAATATAGTGGAAGAAGCAGCACCTTTGCAGATATCCAATGTTCAATTTTTTTGCTCAAAATGCGATGCTGGAGTGCGTTTGGGGTATAAGCTGGAACAAGATGGCACGAAATCCAGATTCTGTAAAAAGTGCGGAACTACCATCGCCAAATAA
PROTEIN sequence
Length: 109
VNGKTKLKKGDQVVVTTGKEKGKKGEISELILKRMRVLITGVNVVKKHKKSQSENKKPNIVEEAAPLQISNVQFFCSKCDAGVRLGYKLEQDGTKSRFCKKCGTTIAK*