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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Metagenomic Context

Parent: BJP_Ig2102_UNK

Properties

Avg. coverage: 4.62 Longest contig: 25.04 Kbp Bin length: 2.25 Mbp GC content: 51.25 %
Contigs count: 1040 Features count: 2841 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 44 / 55 MC: 2 BSCG 40 / 51 MC: 1 ASCG 10 / 38 MC: 4

Description

Moderate, probably partial

Displaying items 501-550 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_27586
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1527 bp 54.35 4.75 99.61
bjp_ig2102_scaffold_23291
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1760 bp 51.48 4.46 82.16
bjp_ig2102_scaffold_29507
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1445 bp 49.69 4.60 84.08
bjp_ig2102_scaffold_27076
Species: Sphaerochaeta pleomorpha (50%)
2 1553 bp 52.67 3.11 69.54
bjp_ig2102_scaffold_26412
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1585 bp 53.82 5.34 93.31
bjp_ig2102_scaffold_42348
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1063 bp 53.34 4.26 92.00
bjp_ig2102_scaffold_19989
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1997 bp 51.68 4.08 74.21
bjp_ig2102_scaffold_45374
Species: Sphaerochaeta pleomorpha (100%)
2 1001 bp 54.75 4.07 101.30
bjp_ig2102_scaffold_25239
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1644 bp 45.32 3.12 100.18
bjp_ig2102_scaffold_26415
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1585 bp 51.74 4.57 92.37
bjp_ig2102_scaffold_44834
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1012 bp 51.78 4.33 75.59
bjp_ig2102_scaffold_40602
Species: Sphaerochaeta coccoides (50%)
2 1103 bp 54.40 3.70 98.73
bjp_ig2102_scaffold_29771
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1434 bp 48.61 4.53 93.72
bjp_ig2102_scaffold_42355
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1063 bp 46.57 4.55 73.66
bjp_ig2102_scaffold_25500
Species: BJP_IG2157_Clostridiales_52_13 (100%)
2 1631 bp 54.32 4.35 89.39
bjp_ig2102_scaffold_26420
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1585 bp 50.28 3.91 99.37
bjp_ig2102_scaffold_44837
Species: Sphaerochaeta pleomorpha (50%)
2 1012 bp 43.38 5.37 69.66
bjp_ig2102_scaffold_40349
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1110 bp 48.20 5.58 91.89
bjp_ig2102_scaffold_43469
Species: Treponema azotonutricium (50%)
2 1040 bp 48.27 3.19 100.10
bjp_ig2102_scaffold_26167
Species: BJP_IG2157_Clostridiales_52_13 (100%)
2 1597 bp 50.91 3.97 84.72
bjp_ig2102_scaffold_41001
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1095 bp 55.43 3.59 98.36
bjp_ig2102_scaffold_26169
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1597 bp 49.09 5.11 95.24
bjp_ig2102_scaffold_26937
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1559 bp 50.93 4.07 84.86
bjp_ig2102_scaffold_27347
Species: Sphaerochaeta pleomorpha (50%)
2 1539 bp 50.16 4.22 75.63
bjp_ig2102_scaffold_23563
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1745 bp 49.34 4.59 81.49
bjp_ig2102_scaffold_30147
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1420 bp 54.86 4.57 100.35
bjp_ig2102_scaffold_26683
Species: GWB1_Spirochaetes_48_6_curated (50%)
2 1572 bp 49.68 5.09 92.37
bjp_ig2102_scaffold_25766
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1616 bp 55.94 3.36 93.94
bjp_ig2102_scaffold_16046
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2401 bp 51.81 5.03 97.71
bjp_ig2102_scaffold_22207
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1830 bp 53.50 4.21 95.08
bjp_ig2102_scaffold_41007
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1094 bp 47.26 4.42 77.88
bjp_ig2102_scaffold_23568
Species: Spirochaeta smaragdinae (50%)
2 1745 bp 50.03 4.76 93.01
bjp_ig2102_scaffold_21545
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1874 bp 54.70 3.71 93.97
bjp_ig2102_scaffold_35897
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1225 bp 49.55 5.67 91.59
bjp_ig2102_scaffold_33914
Species: Sphaerochaeta pleomorpha (100%)
2 1284 bp 54.05 4.82 99.53
bjp_ig2102_scaffold_35130
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1248 bp 49.28 4.11 95.91
bjp_ig2102_scaffold_22979
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1781 bp 56.60 4.83 83.89
bjp_ig2102_scaffold_13747
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2729 bp 51.30 4.76 81.68
bjp_ig2102_scaffold_34083
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1280 bp 54.69 5.19 99.84
bjp_ig2102_scaffold_22212
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1829 bp 46.47 5.70 56.10
bjp_ig2102_scaffold_24286 2 1699 bp 53.27 5.51 87.93
bjp_ig2102_scaffold_18966
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2085 bp 53.29 4.06 99.42
bjp_ig2102_scaffold_28167
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
2 1501 bp 53.30 4.33 67.55
bjp_ig2102_scaffold_13496
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2768 bp 51.05 4.26 79.88
bjp_ig2102_scaffold_22729
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1797 bp 53.98 6.22 94.49
bjp_ig2102_scaffold_14177
Species: Sphaerochaeta coccoides (50%)
2 2658 bp 49.51 4.09 98.08
bjp_ig2102_scaffold_41017
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1094 bp 53.93 3.45 99.54
bjp_ig2102_scaffold_40369
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1109 bp 48.51 4.22 76.01
bjp_ig2102_scaffold_30930
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1391 bp 53.27 4.78 95.54
bjp_ig2102_scaffold_18971
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2085 bp 52.33 5.58 100.43
Displaying items 501-550 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.