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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 451-500 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_36525
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1208 bp 49.17 3.25 88.91
bjp_ig2102_scaffold_8895
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 3918 bp 53.47 5.01 89.74
bjp_ig2102_scaffold_15074
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
3 2533 bp 54.60 4.89 94.28
bjp_ig2102_scaffold_33868
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1286 bp 54.82 4.34 83.05
bjp_ig2102_scaffold_21756
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1861 bp 50.67 3.98 95.27
bjp_ig2102_scaffold_36788
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1200 bp 54.00 5.03 99.50
bjp_ig2102_scaffold_28885
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1472 bp 48.37 4.10 89.27
bjp_ig2102_scaffold_33357
Species: Paenibacillus beijingensis (50%)
2 1304 bp 48.31 2.89 90.87
bjp_ig2102_scaffold_29997
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1426 bp 49.93 4.66 100.56
bjp_ig2102_scaffold_22166
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1832 bp 51.26 4.37 100.22
bjp_ig2102_scaffold_15334
Species: Treponema azotonutricium (50%)
2 2496 bp 54.97 3.99 92.31
bjp_ig2102_scaffold_32718
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1327 bp 46.19 3.98 99.92
bjp_ig2102_scaffold_29998
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1426 bp 54.49 4.34 95.51
bjp_ig2102_scaffold_19711
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2019 bp 51.06 4.19 94.21
bjp_ig2102_scaffold_16008
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 2405 bp 52.39 4.90 93.93
bjp_ig2102_scaffold_18664
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2114 bp 49.43 5.21 75.50
bjp_ig2102_scaffold_18920
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 2090 bp 49.76 4.48 100.34
bjp_ig2102_scaffold_41992
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1071 bp 40.62 4.93 66.11
bjp_ig2102_scaffold_26648
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1574 bp 52.35 4.22 99.11
bjp_ig2102_scaffold_19202
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2064 bp 53.44 3.51 98.69
bjp_ig2102_scaffold_19458
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 2041 bp 55.32 4.29 98.33
bjp_ig2102_scaffold_40835
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1098 bp 56.38 4.13 97.81
bjp_ig2102_scaffold_30115
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1421 bp 49.05 4.36 71.15
bjp_ig2102_scaffold_31675
Species: Sphaerochaeta pleomorpha (50%)
2 1363 bp 53.41 4.32 84.08
bjp_ig2102_scaffold_42844
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1052 bp 55.42 4.16 90.40
bjp_ig2102_scaffold_17309
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2252 bp 47.51 4.63 86.72
bjp_ig2102_scaffold_30117
Species: RBG_13_ACD39_59_9_curated (50%)
2 1421 bp 48.49 2.76 83.18
bjp_ig2102_scaffold_29749
Species: Sphaerochaeta pleomorpha (50%)
2 1435 bp 55.26 4.84 98.89
bjp_ig2102_scaffold_42845
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1052 bp 55.80 5.88 93.54
bjp_ig2102_scaffold_16526
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2343 bp 56.38 4.51 97.82
bjp_ig2102_scaffold_29494
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1445 bp 53.43 3.66 96.75
bjp_ig2102_scaffold_17567
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 2224 bp 49.55 4.35 94.96
bjp_ig2102_scaffold_41744
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1077 bp 54.87 4.21 88.02
bjp_ig2102_scaffold_20617
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1944 bp 51.65 4.74 75.31
bjp_ig2102_scaffold_37953
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1169 bp 51.50 4.00 101.37
bjp_ig2102_scaffold_43706
Species: BJP_IG2103_Clostridiales_50_15 (100%)
2 1035 bp 53.82 3.50 98.26
bjp_ig2102_scaffold_20877
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1923 bp 56.84 4.08 95.32
bjp_ig2102_scaffold_37957
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1169 bp 49.19 5.04 91.62
bjp_ig2102_scaffold_26917
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1561 bp 52.72 5.51 90.13
bjp_ig2102_scaffold_27582
Species: Sphaerochaeta pleomorpha (50%)
2 1528 bp 50.26 4.55 94.44
bjp_ig2102_scaffold_19214
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2063 bp 48.57 5.42 100.34
bjp_ig2102_scaffold_22439
Species: Sphaerochaeta coccoides (100%)
2 1816 bp 55.84 3.41 100.11
bjp_ig2102_scaffold_24511
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1684 bp 45.67 4.57 98.34
bjp_ig2102_scaffold_29503
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1445 bp 51.00 4.60 93.84
bjp_ig2102_scaffold_42087
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1069 bp 53.04 3.39 99.63
bjp_ig2102_scaffold_13208
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 2819 bp 52.25 3.54 93.12
bjp_ig2102_scaffold_42088
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1069 bp 45.56 3.81 45.74
bjp_ig2102_scaffold_43457
Species: BJP_IG2103_Clostridiales_50_15 (100%)
2 1040 bp 55.29 3.78 97.21
bjp_ig2102_scaffold_13722
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2731 bp 49.95 4.87 99.52
bjp_ig2102_scaffold_27330
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1540 bp 54.68 4.02 99.35
Displaying items 451-500 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.