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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 401-450 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_14582
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2603 bp 54.86 4.00 98.89
bjp_ig2102_scaffold_35286
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1244 bp 52.89 4.25 86.58
bjp_ig2102_scaffold_26591
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1577 bp 45.21 4.79 76.66
bjp_ig2102_scaffold_5776
Order: Spirochaetales (66.67%)
3 5761 bp 50.82 4.95 57.02
bjp_ig2102_scaffold_29690
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1438 bp 54.52 2.94 100.35
bjp_ig2102_scaffold_26851
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1564 bp 54.03 4.34 94.57
bjp_ig2102_scaffold_37380
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1185 bp 53.84 2.93 91.65
bjp_ig2102_scaffold_20557
Species: Sphaerochaeta pleomorpha (66.67%)
3 1950 bp 51.03 5.03 84.77
bjp_ig2102_scaffold_28581
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1484 bp 55.32 4.17 98.65
bjp_ig2102_scaffold_28327
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1494 bp 54.08 4.75 99.60
bjp_ig2102_scaffold_15799
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2434 bp 53.66 5.34 84.18
bjp_ig2102_scaffold_17768
Phylum: Spirochaetes (66.67%)
3 2205 bp 53.97 6.23 83.40
bjp_ig2102_scaffold_13657
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2742 bp 54.01 4.96 97.05
bjp_ig2102_scaffold_23993
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1717 bp 56.14 4.66 100.29
bjp_ig2102_scaffold_8604
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 4030 bp 55.19 4.05 88.06
bjp_ig2102_scaffold_17516
Species: Sphaerochaeta pleomorpha (66.67%)
3 2230 bp 52.87 4.20 69.96
bjp_ig2102_scaffold_14341
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2635 bp 47.13 5.04 99.73
bjp_ig2102_scaffold_8862
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 3932 bp 55.52 3.80 89.04
bjp_ig2102_scaffold_16734
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2320 bp 50.34 5.53 93.10
bjp_ig2102_scaffold_30583
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1404 bp 46.30 3.23 94.44
bjp_ig2102_scaffold_18112
Species: Sphaerochaeta coccoides (66.67%)
3 2167 bp 51.87 4.88 100.37
bjp_ig2102_scaffold_29704
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1437 bp 55.67 3.89 96.66
bjp_ig2102_scaffold_21722
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1862 bp 50.11 4.78 81.53
bjp_ig2102_scaffold_38522
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
3 1155 bp 54.29 3.27 101.56
bjp_ig2102_scaffold_25691
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1620 bp 49.81 5.13 101.67
bjp_ig2102_scaffold_9174
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 3818 bp 50.71 5.62 85.88
bjp_ig2102_scaffold_31894
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1355 bp 47.31 3.79 69.30
bjp_ig2102_scaffold_16999
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (66.67%)
3 2289 bp 49.85 5.28 99.21
bjp_ig2102_scaffold_10154
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 3508 bp 47.23 4.69 88.68
bjp_ig2102_scaffold_33330
Order: Spirochaetales (66.67%)
3 1305 bp 48.97 4.74 83.91
bjp_ig2102_scaffold_19682
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2021 bp 52.45 5.01 92.18
bjp_ig2102_scaffold_16492
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2347 bp 55.94 5.21 85.39
bjp_ig2102_scaffold_18381
Phylum: Spirochaetes (66.67%)
3 2141 bp 54.55 5.15 107.05
bjp_ig2102_scaffold_32693
Phylum: Spirochaetes (66.67%)
3 1328 bp 48.34 4.21 83.81
bjp_ig2102_scaffold_19686
Order: Spirochaetales (66.67%)
3 2021 bp 46.86 5.16 99.60
bjp_ig2102_scaffold_26878
Phylum: Spirochaetes (66.67%)
3 1563 bp 51.31 3.96 95.78
bjp_ig2102_scaffold_9695
Species: Sphaerochaeta pleomorpha (66.67%)
3 3651 bp 51.16 5.09 100.16
bjp_ig2102_scaffold_23759
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1731 bp 51.47 4.62 74.52
bjp_ig2102_scaffold_37409
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1184 bp 50.17 3.83 101.35
bjp_ig2102_scaffold_20330
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (66.67%)
3 1969 bp 50.23 4.60 75.57
bjp_ig2102_scaffold_40299
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1111 bp 55.81 2.85 99.37
bjp_ig2102_scaffold_11468
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 3173 bp 54.02 5.04 100.32
bjp_ig2102_scaffold_25197
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1647 bp 53.01 5.78 83.79
bjp_ig2102_scaffold_15575
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
3 2463 bp 56.23 4.84 95.37
bjp_ig2102_scaffold_9192
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 3813 bp 43.17 5.03 78.60
bjp_ig2102_scaffold_17032
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2285 bp 53.00 4.23 100.44
bjp_ig2102_scaffold_18649
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2115 bp 53.33 4.43 86.24
bjp_ig2102_scaffold_24226
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1703 bp 51.91 3.81 79.98
bjp_ig2102_scaffold_14882
Order: Spirochaetales (66.67%)
3 2559 bp 52.72 4.13 96.37
bjp_ig2102_scaffold_19698
Genus: Spirochaeta (66.67%)
3 2020 bp 53.66 5.23 82.87
Displaying items 401-450 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.