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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 351-400 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_9867
Species: Sphaerochaeta pleomorpha (100%)
3 3598 bp 53.81 4.53 96.22
bjp_ig2102_scaffold_24644
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1675 bp 49.91 5.23 92.96
bjp_ig2102_scaffold_16412
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2356 bp 52.16 3.59 87.10
bjp_ig2102_scaffold_28269
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1497 bp 55.98 4.03 76.15
bjp_ig2102_scaffold_19605
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
3 2028 bp 54.39 4.39 87.28
bjp_ig2102_scaffold_34959
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1252 bp 54.71 3.86 96.57
bjp_ig2102_scaffold_17712
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2211 bp 54.00 5.46 93.49
bjp_ig2102_scaffold_20504
Phylum: Spirochaetes (66.67%)
3 1954 bp 52.30 4.10 93.96
bjp_ig2102_scaffold_11130
Phylum: Spirochaetes (66.67%)
3 3249 bp 51.74 4.37 93.81
bjp_ig2102_scaffold_21403
Species: Sphaerochaeta coccoides (66.67%)
3 1884 bp 50.58 4.49 85.83
bjp_ig2102_scaffold_22836
Species: Sphaerochaeta pleomorpha (100%)
3 1792 bp 55.02 4.55 97.27
bjp_ig2102_scaffold_18820
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2099 bp 48.50 4.60 97.76
bjp_ig2102_scaffold_21916
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1850 bp 52.54 3.67 100.38
bjp_ig2102_scaffold_38973
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
3 1144 bp 51.75 5.41 77.62
bjp_ig2102_scaffold_9110
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 3839 bp 52.46 5.74 93.23
bjp_ig2102_scaffold_13606
Species: Sphaerochaeta globosa (100%)
3 2750 bp 55.42 4.67 98.51
bjp_ig2102_scaffold_17720
Order: Spirochaetales (66.67%)
3 2210 bp 55.66 4.17 100.18
bjp_ig2102_scaffold_12232
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
3 3001 bp 52.88 4.58 85.37
bjp_ig2102_scaffold_14035
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2682 bp 47.50 4.22 93.85
bjp_ig2102_scaffold_34459
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1267 bp 56.35 5.24 101.34
bjp_ig2102_scaffold_31067
Order: Spirochaetales (66.67%)
3 1385 bp 53.36 4.36 90.76
bjp_ig2102_scaffold_25124
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1651 bp 54.51 4.12 99.03
bjp_ig2102_scaffold_13613
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
3 2749 bp 44.63 4.39 97.02
bjp_ig2102_scaffold_22590
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1806 bp 48.67 4.43 94.35
bjp_ig2102_scaffold_31839
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1357 bp 53.21 3.78 95.95
bjp_ig2102_scaffold_42239
Phylum: Spirochaetes (66.67%)
3 1065 bp 54.84 2.98 96.34
bjp_ig2102_scaffold_15248
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
3 2508 bp 51.00 4.33 92.46
bjp_ig2102_scaffold_42496
Species: Sphaerochaeta globosa (66.67%)
3 1060 bp 50.19 5.13 89.43
bjp_ig2102_scaffold_11401
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 3192 bp 51.88 5.58 93.52
bjp_ig2102_scaffold_20522
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1952 bp 50.31 3.56 80.53
bjp_ig2102_scaffold_28802
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1475 bp 50.31 3.48 96.00
bjp_ig2102_scaffold_18581
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 2122 bp 50.94 6.19 97.55
bjp_ig2102_scaffold_38222
Species: BJP_IG2103_Clostridiales_50_15 (100%)
3 1162 bp 48.45 3.77 87.26
bjp_ig2102_scaffold_29151
Order: Spirochaetales (66.67%)
3 1459 bp 52.43 3.83 95.00
bjp_ig2102_scaffold_38992
Order: Spirochaetales (66.67%)
3 1143 bp 53.63 3.83 97.90
bjp_ig2102_scaffold_11154
Phylum: Spirochaetes (66.67%)
3 3243 bp 55.29 4.19 89.82
bjp_ig2102_scaffold_15771
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2438 bp 47.58 4.95 92.29
bjp_ig2102_scaffold_29412
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1449 bp 49.62 3.96 96.69
bjp_ig2102_scaffold_26573
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1578 bp 54.94 4.59 94.68
bjp_ig2102_scaffold_11929
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 3066 bp 52.58 4.19 96.77
bjp_ig2102_scaffold_15778
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2437 bp 51.50 5.51 97.87
bjp_ig2102_scaffold_7187
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 4738 bp 52.20 5.55 89.02
bjp_ig2102_scaffold_34995
Species: Sphaerochaeta globosa (66.67%)
3 1251 bp 52.76 5.19 79.38
bjp_ig2102_scaffold_16965
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2292 bp 55.93 4.08 100.26
bjp_ig2102_scaffold_32909
Phylum: Spirochaetes (66.67%)
3 1321 bp 55.56 5.14 99.70
bjp_ig2102_scaffold_21438
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1881 bp 44.82 5.22 102.71
bjp_ig2102_scaffold_14575
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2604 bp 54.99 5.62 97.81
bjp_ig2102_scaffold_14064
Phylum: Spirochaetes (100%)
3 2677 bp 55.10 4.17 82.70
bjp_ig2102_scaffold_29940
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1428 bp 52.38 6.24 100.21
bjp_ig2102_scaffold_23725
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1734 bp 52.02 4.96 98.62
Displaying items 351-400 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.