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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 801-850 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_36788
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1200 bp 54.00 5.03 99.50
bjp_ig2102_scaffold_16046
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2401 bp 51.81 5.03 97.71
bjp_ig2102_scaffold_14694
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2583 bp 55.79 5.03 100.12
bjp_ig2102_scaffold_9273
Species: BJP_08E140C01_Spirochaeta_53_29 (80%)
5 3786 bp 43.79 5.03 93.50
bjp_ig2102_scaffold_20557
Species: Sphaerochaeta pleomorpha (66.67%)
3 1950 bp 51.03 5.03 84.77
bjp_ig2102_scaffold_10153
Species: GWC2_Spirochaetes_52_13_curated (50%)
4 3509 bp 50.24 5.03 82.59
bjp_ig2102_scaffold_9192
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 3813 bp 43.17 5.03 78.60
bjp_ig2102_scaffold_26895
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1562 bp 50.51 5.03 97.38
bjp_ig2102_scaffold_37957
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1169 bp 49.19 5.04 91.62
bjp_ig2102_scaffold_13759
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 3778 bp 45.16 5.04 37.16
bjp_ig2102_scaffold_30433
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1409 bp 53.44 5.04 98.58
bjp_ig2102_scaffold_33815
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1288 bp 53.18 5.04 74.53
bjp_ig2102_scaffold_14341
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2635 bp 47.13 5.04 99.73
bjp_ig2102_scaffold_11468
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 3173 bp 54.02 5.04 100.32
bjp_ig2102_scaffold_4775
Phylum: Spirochaetes (62.5%)
8 6960 bp 51.15 5.06 93.28
bjp_ig2102_scaffold_5024
Phylum: Spirochaetes (85.71%)
7 6630 bp 51.28 5.06 89.64
bjp_ig2102_scaffold_8152
Species: Sphaerochaeta pleomorpha (75%)
4 4231 bp 54.64 5.07 88.99
bjp_ig2102_scaffold_30698
Species: Sphaerochaeta pleomorpha (100%)
2 1399 bp 55.68 5.07 87.28
bjp_ig2102_scaffold_23362
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1756 bp 56.32 5.07 99.26
bjp_ig2102_scaffold_10032
Phylum: Spirochaetes (50%)
4 3541 bp 48.09 5.07 69.05
bjp_ig2102_scaffold_34960
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1252 bp 55.11 5.07 100.40
bjp_ig2102_scaffold_11661
Phylum: Spirochaetes (60%)
5 3130 bp 49.30 5.07 88.08
bjp_ig2102_scaffold_14061
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2678 bp 55.19 5.07 99.93
bjp_ig2102_scaffold_22954
Species: RBG_13_Spirochaetes_68_11_curated (100%)
1 1783 bp 52.27 5.08 87.49
bjp_ig2102_scaffold_7040
Species: GWC2_Spirochaetes_52_13_curated (57.14%)
7 4819 bp 51.65 5.08 93.26
bjp_ig2102_scaffold_7103
Species: GWC2_Spirochaetes_52_13_curated (60%)
5 4786 bp 52.26 5.08 92.52
bjp_ig2102_scaffold_26683
Species: GWB1_Spirochaetes_48_6_curated (50%)
2 1572 bp 49.68 5.09 92.37
bjp_ig2102_scaffold_6946
Phylum: Spirochaetes (50%)
6 4866 bp 51.85 5.09 75.71
bjp_ig2102_scaffold_14706
Species: GWC2_Spirochaetes_52_13_curated (75%)
4 2582 bp 49.81 5.09 83.31
bjp_ig2102_scaffold_30035
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1424 bp 48.74 5.09 99.86
bjp_ig2102_scaffold_12260
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2998 bp 45.00 5.09 91.56
bjp_ig2102_scaffold_9695
Species: Sphaerochaeta pleomorpha (66.67%)
3 3651 bp 51.16 5.09 100.16
bjp_ig2102_scaffold_7492
Species: BJP_08E140C01_Spirochaeta_53_29 (80%)
5 4563 bp 54.90 5.10 85.08
bjp_ig2102_scaffold_26169
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1597 bp 49.09 5.11 95.24
bjp_ig2102_scaffold_24052
Species: GWB1_Spirochaetes_60_80_curated (50%)
2 1714 bp 56.36 5.11 88.21
bjp_ig2102_scaffold_23602
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1742 bp 51.44 5.11 87.83
bjp_ig2102_scaffold_32592
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1331 bp 49.59 5.11 92.19
bjp_ig2102_scaffold_6320
Species: GWB1_Spirochaetes_59_5_curated (60%)
5 5319 bp 51.38 5.11 95.94
bjp_ig2102_scaffold_22707
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1798 bp 51.50 5.12 81.76
bjp_ig2102_scaffold_5892
Species: BJP_08E140C01_Spirochaeta_53_29 (80%)
5 5665 bp 47.94 5.12 90.77
bjp_ig2102_scaffold_10260
Species: Spirochaeta smaragdinae (50%)
4 3477 bp 53.98 5.12 95.69
bjp_ig2102_scaffold_9310
Species: GWC2_Spirochaetes_52_13_curated (75%)
4 3772 bp 52.78 5.12 85.26
bjp_ig2102_scaffold_13650
Species: BJP_08E140C01_Spirochaeta_53_29 (60%)
5 2744 bp 46.90 5.12 82.65
bjp_ig2102_scaffold_45391
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1000 bp 50.00 5.13 99.60
bjp_ig2102_scaffold_18294
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2149 bp 44.49 5.13 98.56
bjp_ig2102_scaffold_42496
Species: Sphaerochaeta globosa (66.67%)
3 1060 bp 50.19 5.13 89.43
bjp_ig2102_scaffold_10393
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
4 3442 bp 52.18 5.13 82.54
bjp_ig2102_scaffold_25691
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1620 bp 49.81 5.13 101.67
bjp_ig2102_scaffold_43925
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1030 bp 52.33 5.13 98.16
bjp_ig2102_scaffold_20358
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1967 bp 55.11 5.14 97.76
Displaying items 801-850 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.