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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 851-900 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_10313
Species: RBG_13_Spirochaetes_68_11_curated (50%)
4 3464 bp 50.23 5.14 90.16
bjp_ig2102_scaffold_32909
Phylum: Spirochaetes (66.67%)
3 1321 bp 55.56 5.14 99.70
bjp_ig2102_scaffold_21501
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1877 bp 54.82 5.15 100.05
bjp_ig2102_scaffold_21107
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1905 bp 54.17 5.15 97.64
bjp_ig2102_scaffold_37835
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1172 bp 47.18 5.15 82.68
bjp_ig2102_scaffold_42733
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1055 bp 46.64 5.15 92.70
bjp_ig2102_scaffold_18381
Phylum: Spirochaetes (66.67%)
3 2141 bp 54.55 5.15 107.05
bjp_ig2102_scaffold_16509
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2345 bp 54.41 5.15 94.93
bjp_ig2102_scaffold_12631
Species: BJP_08E140C01_Spirochaeta_53_29 (75%)
4 2924 bp 54.72 5.16 96.65
bjp_ig2102_scaffold_22476
Species: Sphaerochaeta pleomorpha (50%)
2 1814 bp 55.79 5.16 89.64
bjp_ig2102_scaffold_7345
Species: BJP_08E140C01_Spirochaeta_53_29 (75%)
4 4652 bp 47.01 5.16 95.51
bjp_ig2102_scaffold_27690
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1523 bp 53.05 5.16 95.93
bjp_ig2102_scaffold_44200
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1025 bp 55.02 5.16 100.10
bjp_ig2102_scaffold_19686
Order: Spirochaetales (66.67%)
3 2021 bp 46.86 5.16 99.60
bjp_ig2102_scaffold_17040
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 2284 bp 50.18 5.16 64.36
bjp_ig2102_scaffold_14384
Species: BJP_08E140C01_Spirochaeta_53_29 (75%)
4 2629 bp 54.58 5.17 83.53
bjp_ig2102_scaffold_3426
Species: GWC2_Spirochaetes_52_13_curated (57.14%)
7 9675 bp 52.61 5.17 98.23
bjp_ig2102_scaffold_40351
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1110 bp 48.92 5.17 64.05
bjp_ig2102_scaffold_36878
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1198 bp 53.76 5.17 99.92
bjp_ig2102_scaffold_15434
Order: Spirochaetales (66.67%)
3 2483 bp 53.81 5.17 95.21
bjp_ig2102_scaffold_39121
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1140 bp 50.96 5.17 100.00
bjp_ig2102_scaffold_35937
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1224 bp 52.04 5.18 88.24
bjp_ig2102_scaffold_7364
Phylum: Spirochaetes (80%)
5 4639 bp 50.77 5.18 86.33
bjp_ig2102_scaffold_28503
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 1488 bp 55.38 5.18 92.34
bjp_ig2102_scaffold_44427
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1020 bp 51.57 5.18 100.00
bjp_ig2102_scaffold_41668
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1079 bp 53.75 5.18 100.09
bjp_ig2102_scaffold_7780
Order: Spirochaetales (57.14%)
7 4419 bp 53.41 5.19 92.40
bjp_ig2102_scaffold_34083
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1280 bp 54.69 5.19 99.84
bjp_ig2102_scaffold_6423
Species: GWC2_Spirochaetes_52_13_curated (50%)
6 5236 bp 47.50 5.19 98.26
bjp_ig2102_scaffold_34995
Species: Sphaerochaeta globosa (66.67%)
3 1251 bp 52.76 5.19 79.38
bjp_ig2102_scaffold_9918
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 3579 bp 45.15 5.19 99.66
bjp_ig2102_scaffold_3704
Species: BJP_08E140C01_Spirochaeta_53_29 (55.56%)
9 8938 bp 47.01 5.20 95.05
bjp_ig2102_scaffold_9135
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
4 3834 bp 51.51 5.20 92.41
bjp_ig2102_scaffold_31663
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1364 bp 49.56 5.20 88.64
bjp_ig2102_scaffold_18664
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2114 bp 49.43 5.21 75.50
bjp_ig2102_scaffold_35205
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1246 bp 51.61 5.21 93.66
bjp_ig2102_scaffold_16492
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2347 bp 55.94 5.21 85.39
bjp_ig2102_scaffold_13283
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 2807 bp 51.62 5.22 95.87
bjp_ig2102_scaffold_15177
Phylum: Spirochaetes (50%)
4 2518 bp 45.39 5.22 92.57
bjp_ig2102_scaffold_31780
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1359 bp 56.51 5.22 85.21
bjp_ig2102_scaffold_19633
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2026 bp 51.23 5.22 96.69
bjp_ig2102_scaffold_21438
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1881 bp 44.82 5.22 102.71
bjp_ig2102_scaffold_33452
Species: GWC2_Spirochaetes_52_13_curated (100%)
3 1300 bp 46.92 5.23 93.23
bjp_ig2102_scaffold_15450
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2481 bp 52.44 5.23 99.88
bjp_ig2102_scaffold_21119
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1904 bp 49.37 5.23 79.88
bjp_ig2102_scaffold_31045
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1386 bp 53.46 5.23 98.92
bjp_ig2102_scaffold_24644
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 1675 bp 49.91 5.23 92.96
bjp_ig2102_scaffold_19698
Genus: Spirochaeta (66.67%)
3 2020 bp 53.66 5.23 82.87
bjp_ig2102_scaffold_16573
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2336 bp 56.46 5.24 94.26
bjp_ig2102_scaffold_28248
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1498 bp 44.26 5.24 66.29
Displaying items 851-900 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.