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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 951-1000 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_44082
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1027 bp 50.05 5.44 99.90
bjp_ig2102_scaffold_16885
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2302 bp 54.87 5.44 94.35
bjp_ig2102_scaffold_39251
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1136 bp 52.20 5.45 98.77
bjp_ig2102_scaffold_9028
Order: Spirochaetales (50%)
4 3869 bp 53.04 5.46 79.87
bjp_ig2102_scaffold_12170
Species: GWC2_Spirochaetes_52_13_curated (50%)
6 3016 bp 50.17 5.46 96.39
bjp_ig2102_scaffold_17712
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2211 bp 54.00 5.46 93.49
bjp_ig2102_scaffold_40499
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1106 bp 51.36 5.46 98.19
bjp_ig2102_scaffold_38268
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1161 bp 54.95 5.46 94.06
bjp_ig2102_scaffold_37328
Species: Sphaerochaeta pleomorpha (50%)
2 1186 bp 49.24 5.47 57.93
bjp_ig2102_scaffold_32105
Species: Sphaerochaeta coccoides (100%)
1 1348 bp 50.45 5.49 95.03
bjp_ig2102_scaffold_9016
Species: BJP_08E140C01_Spirochaeta_53_29 (83.33%)
6 3873 bp 44.28 5.50 90.63
bjp_ig2102_scaffold_37533
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1180 bp 43.14 5.50 88.98
bjp_ig2102_scaffold_18075
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 2170 bp 51.15 5.50 93.59
bjp_ig2102_scaffold_13636
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2745 bp 53.30 5.50 93.88
bjp_ig2102_scaffold_26917
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1561 bp 52.72 5.51 90.13
bjp_ig2102_scaffold_24286 2 1699 bp 53.27 5.51 87.93
bjp_ig2102_scaffold_15778
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2437 bp 51.50 5.51 97.87
bjp_ig2102_scaffold_43468
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1040 bp 52.79 5.52 99.81
bjp_ig2102_scaffold_20312
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1970 bp 52.08 5.52 84.06
bjp_ig2102_scaffold_16734
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2320 bp 50.34 5.53 93.10
bjp_ig2102_scaffold_7187
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 4738 bp 52.20 5.55 89.02
bjp_ig2102_scaffold_24083
Species: GWC2_Spirochaetes_52_13_curated (50%)
4 1712 bp 49.24 5.56 98.13
bjp_ig2102_scaffold_17846
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2197 bp 45.70 5.57 100.36
bjp_ig2102_scaffold_33410
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1302 bp 52.00 5.57 89.63
bjp_ig2102_scaffold_40349
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1110 bp 48.20 5.58 91.89
bjp_ig2102_scaffold_18971
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2085 bp 52.33 5.58 100.43
bjp_ig2102_scaffold_11401
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 3192 bp 51.88 5.58 93.52
bjp_ig2102_scaffold_40435
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1108 bp 45.13 5.59 77.98
bjp_ig2102_scaffold_44213
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1025 bp 55.80 5.60 101.27
bjp_ig2102_scaffold_41724
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1078 bp 40.35 5.60 84.88
bjp_ig2102_scaffold_33657
Species: GWC2_Spirochaetes_52_13_curated (50%)
1 1293 bp 51.04 5.61 72.85
bjp_ig2102_scaffold_39464
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1130 bp 52.39 5.61 99.82
bjp_ig2102_scaffold_14575
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 2604 bp 54.99 5.62 97.81
bjp_ig2102_scaffold_9174
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
3 3818 bp 50.71 5.62 85.88
bjp_ig2102_scaffold_6162
Order: Spirochaetales (66.67%)
6 5444 bp 44.20 5.63 93.52
bjp_ig2102_scaffold_21968
Phylum: Spirochaetes (50%)
4 1846 bp 55.42 5.64 108.40
bjp_ig2102_scaffold_5065
Species: BJP_08E140C01_Spirochaeta_53_29 (66.67%)
6 6573 bp 50.48 5.67 92.56
bjp_ig2102_scaffold_35897
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1225 bp 49.55 5.67 91.59
bjp_ig2102_scaffold_5411
Species: GWC2_Spirochaetes_52_13_curated (56.25%)
16 6130 bp 49.27 5.67 94.70
bjp_ig2102_scaffold_7368
Species: GWC2_Spirochaetes_52_13_curated (75%)
4 4636 bp 51.45 5.67 95.19
bjp_ig2102_scaffold_24643
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 2422 bp 50.74 5.67 47.44
bjp_ig2102_scaffold_25733
Species: BJP_08E140C01_Spirochaeta_53_29 (75%)
4 1618 bp 47.71 5.69 90.67
bjp_ig2102_scaffold_41240
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1089 bp 52.43 5.69 98.07
bjp_ig2102_scaffold_4895
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
6 6796 bp 52.55 5.69 92.30
bjp_ig2102_scaffold_31920
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1354 bp 43.80 5.69 96.16
bjp_ig2102_scaffold_22212
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1829 bp 46.47 5.70 56.10
bjp_ig2102_scaffold_14262
Species: GWC2_Spirochaetes_52_13_curated (66.67%)
3 2647 bp 51.79 5.70 93.05
bjp_ig2102_scaffold_35287
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1244 bp 49.60 5.70 86.82
bjp_ig2102_scaffold_14522
Order: Spirochaetales (66.67%)
3 2611 bp 53.31 5.73 91.11
bjp_ig2102_scaffold_9166
Species: GWC2_Spirochaetes_52_13_curated (50%)
4 3821 bp 50.62 5.73 87.94
Displaying items 951-1000 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.