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bjp_ig2599_scaffold_656

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_656_1
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..904
DNA (903bp) protein (301aa)
P-type DNA transfer ATPase, VirB11 n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAY0_METSZ
P-type DNA transfer ATPase, VirB11 {ECO:0000313|EMBL:CCD32136.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocy
avhB11a; type IV secretion protein
bjp_ig2599_scaffold_656_2
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

912..3113
DNA (2202bp) protein (734aa)
Plasmid conjugal transfer protein, TraG family n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAX9_METSZ rbh
Plasmid conjugal transfer protein, TraG family {ECO:0000313|EMBL:CCD32135.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" sourc
TRAG protein
bjp_ig2599_scaffold_656_3
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3177..3380)
DNA (204bp) protein (68aa)
Peptidase M, neutral zinc metallopeptidase, zinc-binding site n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAX8_METSZ
Peptidase M, neutral zinc metallopeptidase, zinc-binding site {ECO:0000313|EMBL:CCD32134.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylo
peptidase M, neutral zinc metallopeptidase, zinc-binding site
bjp_ig2599_scaffold_656_4
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3563..4555)
DNA (993bp) protein (331aa)
Phage integrase family protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UKJ3_SINMW rbh
Integrase {ECO:0000313|EMBL:KGJ01712.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
phage integrase family protein
bjp_ig2599_scaffold_656_5
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4552..5496)
DNA (945bp) protein (315aa)
Phage integrase family protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UKJ2_SINMW rbh
Integrase {ECO:0000313|EMBL:KGE79899.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium
phage integrase family protein rbh
bjp_ig2599_scaffold_656_6
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5493..6707)
DNA (1215bp) protein (405aa)
Phage integrase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSU9_RHITR rbh
Integrase {ECO:0000313|EMBL:KGJ01710.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
phage integrase family protein
bjp_ig2599_scaffold_656_7
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6947..7783
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037E9C15 rbh
Hydrolase {ECO:0000313|EMBL:KEQ09958.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium
hydrolase
bjp_ig2599_scaffold_656_8
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7805..8578)
DNA (774bp) protein (258aa)
Peptidase M, neutral zinc metallopeptidase, zinc-binding site n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAX8_METSZ rbh
Peptidase M, neutral zinc metallopeptidase, zinc-binding site {ECO:0000313|EMBL:CCD32134.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylo
peptidase M, neutral zinc metallopeptidase, zinc-binding site
bjp_ig2599_scaffold_656_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8922..10784)
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M6U2_RHIL3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAK03040.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
bjp_ig2599_scaffold_656_10
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10995..11711)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D4J9_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEW56541.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter
hypothetical protein
bjp_ig2599_scaffold_656_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11708..14923)
DNA (3216bp) protein (1072aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3N3_POLGS rbh
Restriction endonuclease subunit R {ECO:0000313|EMBL:EZQ16087.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
Type I site-specific deoxyribonuclease, HsdR family
bjp_ig2599_scaffold_656_12
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14920..15768)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SMX2_NITWN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA06369.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winograds
bjp_ig2599_scaffold_656_13
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15761..17212)
DNA (1452bp) protein (484aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SMX3_NITWN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABA06368.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winograds
bjp_ig2599_scaffold_656_14

Not on your lists

comp(17212..18393)
DNA (1182bp) protein (394aa)
RmeS n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D4J5_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN74400.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
bjp_ig2599_scaffold_656_15
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18386..19411)
DNA (1026bp) protein (342aa)
Putative DNA-binding protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SMX5_NITWN rbh
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:ABA06366.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter wino
bjp_ig2599_scaffold_656_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19404..20921)
DNA (1518bp) protein (506aa)
Type I restriction-modification system, M subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4C8_9PROT rbh
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EDP61069.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
type I restriction-modification system, M subunit
bjp_ig2599_scaffold_656_17
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20918..21559)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVM8_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63961.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
bjp_ig2599_scaffold_656_18
unknown

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comp(21723..21890)
DNA (168bp) protein (56aa)

This feature has no annotations

bjp_ig2599_scaffold_656_19
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21877..24843)
DNA (2967bp) protein (989aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAW4_METSZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD32120.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (s
hypothetical protein
bjp_ig2599_scaffold_656_20
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24840..25247)
DNA (408bp) protein (136aa)
Mobilization protein, MobC n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAW3_METSZ
Mobilization protein, MobC {ECO:0000313|EMBL:CCD32119.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp.
hypothetical protein
bjp_ig2599_scaffold_656_21
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25667..26065
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAW2_METSZ
Uncharacterized protein {ECO:0000313|EMBL:CCD32118.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (s
bjp_ig2599_scaffold_656_22
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26077..26703
DNA (627bp) protein (209aa)
Mobilisation protein, MobD n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAW1_METSZ rbh
Mobilisation protein, MobD {ECO:0000313|EMBL:CCD32117.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp.
MobD
bjp_ig2599_scaffold_656_23
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26696..27124
DNA (429bp) protein (143aa)
Mobilisation protein, MobE n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAW0_METSZ
Mobilisation protein, MobE {ECO:0000313|EMBL:CCD32116.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp.
MobE
bjp_ig2599_scaffold_656_24
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27210..27497)
DNA (288bp) protein (96aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAV9_METSZ
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein {ECO:0000313|EMBL:CCD32115.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Meth
succinoglycan biosynthesis protein
Displaying 24 items

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