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bjp_ig2599_scaffold_1556

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_1556_1
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(215..1147)
DNA (933bp) protein (311aa)
tRNA pseudouridine synthase B (EC:5.4.99.-); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
tRNA pseudouridine synthase B (EC:5.4.99.-)
tRNA pseudouridine synthase B id=3240441 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
bjp_ig2599_scaffold_1556_2
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1293..2321
DNA (1029bp) protein (343aa)
Diguanylate cyclase n=5 Tax=Pelosinus fermentans RepID=I9AXA9_9FIRM
Diguanylate cyclase {ECO:0000313|EMBL:EIW17532.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
diguanylate cyclase with GAF sensor
bjp_ig2599_scaffold_1556_3
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(2318..3292)
DNA (975bp) protein (325aa)
exopolyphosphatase-related protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Exopolyphosphatase-related protein id=3683893 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
exopolyphosphatase-like protein
bjp_ig2599_scaffold_1556_4
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(3416..3604)
DNA (189bp) protein (63aa)
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RBG_13_Nitrospirae_39_12_curated
Ribosome-binding factor A id=4943454 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
rbfA; ribosome-binding factor A
bjp_ig2599_scaffold_1556_5
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(3814..6123)
DNA (2310bp) protein (770aa)
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Translation initiation factor IF-2 id=3683899 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
infB; translation initiation factor IF-2
bjp_ig2599_scaffold_1556_6
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

6672..7118
DNA (447bp) protein (149aa)
hypothetical protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Putative uncharacterized protein id=3683902 bin=GWF2_Nitrospirae_44_13 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
bjp_ig2599_scaffold_1556_7
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(7259..8500)
DNA (1242bp) protein (414aa)
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92) Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX id=3289776 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
bjp_ig2599_scaffold_1556_8
unknown

Not on your lists

comp(8526..8741)
DNA (216bp) protein (72aa)

This feature has no annotations

bjp_ig2599_scaffold_1556_9
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(8795..9385)
DNA (591bp) protein (197aa)
clpP; ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RBG_13_Nitrospirae_39_12_curated
clpP; ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit id=3683797 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
bjp_ig2599_scaffold_1556_10
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(9386..10717)
DNA (1332bp) protein (444aa)
tig; trigger factor (EC:5.2.1.8); K03545 trigger factor Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
tig; trigger factor (EC:5.2.1.8)
Trigger factor id=3289774 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
bjp_ig2599_scaffold_1556_11
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

11175..13706
DNA (2532bp) protein (844aa)
uvrA1; excinuclease ABC, A subunit; K03701 excinuclease ABC subunit A Tax=CG_Nitrosp_02
Excinuclease ABC, A subunit id=4128304 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
uvrA1; excinuclease ABC subunit A
bjp_ig2599_scaffold_1556_12
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

13703..14851
DNA (1149bp) protein (383aa)
ApbE; thiamine biosynthesis lipoprotein; K03734 thiamine biosynthesis lipoprotein Tax=RBG_13_Nitrospirae_39_12_curated
Membrane-associated lipoprotein involved in thiamine biosynthesis id=4128305 bin=GWF2_Nitrospirae_44_13 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ApbE family lipoprotein
bjp_ig2599_scaffold_1556_13
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

14826..15242
DNA (417bp) protein (139aa)
hypothetical protein Tax=RBG_13_Nitrospirae_39_12_curated
Putative uncharacterized protein id=4128306 bin=GWF2_Nitrospirae_44_13 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
bjp_ig2599_scaffold_1556_14
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

15226..15753
DNA (528bp) protein (176aa)
hypothetical protein Tax=RBG_13_Nitrospirae_39_12_curated
Putative membrane protein id=4128307 bin=GWF2_Nitrospirae_44_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
bjp_ig2599_scaffold_1556_15
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

15851..16723
DNA (873bp) protein (291aa)
dapB2; dihydrodipicolinate reductase (EC:1.3.1.26) Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
dapB1; dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase id=4127269 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
bjp_ig2599_scaffold_1556_16
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

17157..18170
DNA (1014bp) protein (338aa)
ADP-ribosylglycohydrolase n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TNV3_9CYAN rbh
ADP-ribosylation/Crystallin J1 Tax=CG_Nitrosp_02
ADP-ribosylglycohydrolase
bjp_ig2599_scaffold_1556_17
Thermoproteus uzoniensis, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(18183..18542)
DNA (360bp) protein (120aa)
Ferredoxin-dependent glutamate synthase n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L2B2_THEU7
ferredoxin-dependent glutamate synthase
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:AEA11777.1}; TaxID=999630 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermopro
bjp_ig2599_scaffold_1556_18
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(19185..19487)
DNA (303bp) protein (101aa)
plasmid stabilization system Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Putative uncharacterized protein id=2650583 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
plasmid stabilization system
bjp_ig2599_scaffold_1556_19
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(19484..19714)
DNA (231bp) protein (77aa)
addiction module protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Addiction module component, TIGR02574 family id=1771710 bin=GWD2_Nitrospirae-related_57_8 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
addiction module protein
bjp_ig2599_scaffold_1556_20
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19916..20176)
DNA (261bp) protein (87aa)
Tax=RBG_16_Deltaproteobacteria_48_10_curated
bjp_ig2599_scaffold_1556_21
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(20213..20458)
DNA (246bp) protein (82aa)
hypothetical protein Tax=RBG_16_Caldithrix_48_16_curated
Putative uncharacterized protein id=1846602 bin=GWD2_Desulfuromonadales_54_10 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
bjp_ig2599_scaffold_1556_22
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20597..21022)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0T5_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM20938.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii
bjp_ig2599_scaffold_1556_23
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21348..21626)
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE18561.1}; TaxID=1487949 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K
Putative uncharacterized protein id=2997267 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
transposase of ISPca14, Y1_Tnp domain-containing
Displaying 23 items

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