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bjp_ig2599_scaffold_2561

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_2561_1
CG_CPR03_01, CG_CPR03, Bacteria

Not on your lists

558..1223
DNA (666bp) protein (222aa)
Tax=CG_CPR03_01
bjp_ig2599_scaffold_2561_2
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

1306..4476
DNA (3171bp) protein (1057aa)
dnaE; DNA polymerase III DnaE (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RBG_13_RIF_OD1_07_42_11_curated
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000381959E rbh
bjp_ig2599_scaffold_2561_3
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

4485..6239
DNA (1755bp) protein (585aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RBG_13_RIF_OD1_07_42_11_curated
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036DA2A5 rbh
bjp_ig2599_scaffold_2561_4

Not on your lists

6322..8058
DNA (1737bp) protein (579aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO02876.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=2824386 bin=GWC1_OD1_38_17 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
CG32662 gene product from transcript CG32662-RA
bjp_ig2599_scaffold_2561_5
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

8148..9470
DNA (1323bp) protein (441aa)
(dimethylallyl)adenosine tRNA methylthiotransferase (EC:1.3.1.74); K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RBG_13_RIF_OD1_07_36_15_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000378458E rbh
2-methylthioadenine synthetase
bjp_ig2599_scaffold_2561_6
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

9498..10424
DNA (927bp) protein (309aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=CG_CPR10_02
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037FFBA5
tRNA delta(2)-isopentenylpyrophosphate transferase
bjp_ig2599_scaffold_2561_trna_2
unknown

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comp(10585..10659)
DNA (75bp)
transferRNA
bjp_ig2599_scaffold_2561_7
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists

comp(10645..11259)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FF41_9BACT
hypothetical protein Tax=GWA1_OD1_49_17_curated
hypothetical protein
bjp_ig2599_scaffold_2561_trna_1
unknown

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comp(11410..11481)
DNA (72bp)
transferRNA
bjp_ig2599_scaffold_2561_8
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(11923..12450)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003744795
hypothetical protein Tax=CG_CPR10_01
bjp_ig2599_scaffold_2561_9
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(12438..13910)
DNA (1473bp) protein (491aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_CPR10_01
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000363B069 rbh
glutamyl-tRNA(Gln) amidotransferase
bjp_ig2599_scaffold_2561_10
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(13914..14216)
DNA (303bp) protein (101aa)
gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=CG_CPR10_03
gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036E67FD
bjp_ig2599_scaffold_2561_11
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(14329..15411)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037AFFFA
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=CG_CPR10_01
rod shape-determining protein MreB
bjp_ig2599_scaffold_2561_12
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(15519..15860)
DNA (342bp) protein (114aa)
Putative transcriptional regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI24_9BACT
transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
transcriptional regulator
bjp_ig2599_scaffold_2561_13
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(15844..16230)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VYI8_DESAS
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
hypothetical protein
bjp_ig2599_scaffold_2561_14
unknown

Not on your lists

comp(16419..16898)
DNA (480bp) protein (160aa)

This feature has no annotations

bjp_ig2599_scaffold_2561_15
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(17098..18609)
DNA (1512bp) protein (504aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_CPR10_01
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=5084910 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2 rbh
prolyl-tRNA synthetase
bjp_ig2599_scaffold_2561_16
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(19125..20150)
DNA (1026bp) protein (342aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=CG_Pacearch_04
type I glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000375BCE0
Displaying 18 items

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