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bjp_ig2599_scaffold_2897

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_2897_1
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

181..573
DNA (393bp) protein (131aa)
HEPN domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXK5_FERPA
HEPN domain protein Tax=RBG_13_RIF_OD1_07_37_56_curated
HEPN domain protein
bjp_ig2599_scaffold_2897_2
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

558..911
DNA (354bp) protein (118aa)
DNA polymerase beta domain protein region n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXK4_FERPA
DNA polymerase subunit beta; K07076 Tax=RBG_13_RIF_OD1_07_37_56_curated
DNA polymerase subunit beta
bjp_ig2599_scaffold_2897_3
GWF2_OD1_40_10, Parcubacteria, Bacteria

Not on your lists


1070..1462
DNA (393bp) protein (131aa)
50S ribosomal protein L5 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036A0E58
50S ribosomal protein L5 Tax=GWF2_OD1_40_10
50S ribosomal protein L5
bjp_ig2599_scaffold_2897_4

Not on your lists


1811..2182
DNA (372bp) protein (124aa)
30S ribosomal protein S8 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037C1A94
30S ribosomal protein S8 {ECO:0000313|EMBL:KKR47417.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
rpsH; 30S ribosomal protein S8
bjp_ig2599_scaffold_2897_5
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists


2167..2727
DNA (561bp) protein (187aa)
50S ribosomal protein L6 Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
50S ribosomal protein L6 id=5227339 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplF; 50S ribosomal protein L6
bjp_ig2599_scaffold_2897_6
R_OD1_Giovannonibacteria_46_32, Giovannonibacteria, Parcubacteria, Bacteria

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2740..3093
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=RL18_THENN
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated
rplR; 50S ribosomal protein L18
bjp_ig2599_scaffold_2897_7
GWF2_OD1_40_10, Parcubacteria, Bacteria

Not on your lists


3038..3541
DNA (504bp) protein (168aa)
30S ribosomal protein S5 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036A7D71
30S ribosomal protein S5 Tax=GWF2_OD1_40_10
SSU ribosomal protein S5P
bjp_ig2599_scaffold_2897_8
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


3685..4119
DNA (435bp) protein (145aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
50S ribosomal protein L15 id=2824223 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
prpL15; plastid/chloroplast ribosomal protein L15; K02876 large subunit ribosomal protein L15
bjp_ig2599_scaffold_2897_9

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4112..5386
DNA (1275bp) protein (425aa)
Protein translocase subunit SecY {ECO:0000313|EMBL:KKS58052.1}; TaxID=1618823 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_35.;"
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5803331 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
preprotein translocase subunit SecY
bjp_ig2599_scaffold_2897_10
R_RIF_OD1_13_53_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

5431..5640
DNA (210bp) protein (70aa)
Transcriptional regulator, AbrB family Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_53_17_curated
bjp_ig2599_scaffold_2897_11
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

5714..6316
DNA (603bp) protein (201aa)
adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
Adenylate kinase n=1 Tax=uncultured Bacteroidetes bacterium RepID=H5SBN7_9BACT
adenylate kinase
bjp_ig2599_scaffold_2897_12
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

6294..7061
DNA (768bp) protein (256aa)
methionine aminopeptidase, type I (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=2824200 bin=GWC1_OD1_38_17 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig2599_scaffold_2897_13
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

7058..7456
DNA (399bp) protein (133aa)
4-amino-4-deoxychorismate lyase (EC:4.-.-.-); K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
yrrK; putative Holliday junction resolvase (EC:3.1.-.-)
PAS/PAC sensor signal transduction histidine kinase id=1779307 bin=GWE2_Spirochaete_31_10 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
bjp_ig2599_scaffold_2897_14
GWF2_OD1_42_19, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

7465..8211
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036375A1
Glycosyl transferase family protein Tax=GWF2_OD1_42_19
dolichol-P-glucose synthetase
bjp_ig2599_scaffold_2897_15
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

8204..9232
DNA (1029bp) protein (343aa)
Galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
hypothetical protein, partial n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000373656E
bjp_ig2599_scaffold_2897_16
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

Not on your lists

9278..10378
DNA (1101bp) protein (367aa)
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:KKR81870.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
Type IV pilus assembly protein PilM id=5227483 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
pilM; Type IV pilus assembly protein
bjp_ig2599_scaffold_2897_17
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

10380..10916
DNA (537bp) protein (179aa)
seg Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
seg id=5803263 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
bjp_ig2599_scaffold_2897_18
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

10870..11427
DNA (558bp) protein (186aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
bjp_ig2599_scaffold_2897_19
unknown

Not on your lists

11420..11743
DNA (324bp) protein (108aa)

This feature has no annotations

bjp_ig2599_scaffold_2897_trna_1
unknown

Not on your lists

11734..11805
DNA (72bp)
transferRNA
bjp_ig2599_scaffold_2897_20
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

11815..12003
DNA (189bp) protein (63aa)
Putative uncharacterized protein Tax=GWA1_Berkelbacteria_36_10
bjp_ig2599_scaffold_2897_21
GWA2_OD1_39_10_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

12067..12273
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCQ7_DICT6
Uncharacterized protein {ECO:0000313|EMBL:KKQ91954.1}; TaxID=1618611 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA2_39_10.;"
hypothetical protein
bjp_ig2599_scaffold_2897_trna_2
unknown

Not on your lists

12641..12712
DNA (72bp)
transferRNA
bjp_ig2599_scaffold_2897_trna_3
unknown

Not on your lists

12717..12789
DNA (73bp)
transferRNA
Displaying 24 items

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