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bjp_ig2599_scaffold_3822

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_3822_1
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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102..746
DNA (645bp) protein (215aa)
50S ribosomal protein L25 id=4889774 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
50S ribosomal protein L25P Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
50S ribosomal protein L25P
bjp_ig2599_scaffold_3822_2
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

752..1399
DNA (648bp) protein (216aa)
pth; PTH1 family peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=GWB2_Ignavibacteria_35_6b_curated
Peptidyl-tRNA hydrolase id=4365544 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
peptidyl-tRNA hydrolase
bjp_ig2599_scaffold_3822_3
unknown

Not on your lists

1578..1706
DNA (129bp) protein (43aa)

This feature has no annotations

bjp_ig2599_scaffold_3822_4
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1736..2206
DNA (471bp) protein (157aa)
Single-stranded DNA-binding protein id=4889777 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Single-stranded DNA-binding protein Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Single-stranded DNA-binding protein
bjp_ig2599_scaffold_3822_5
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


2203..2430
DNA (228bp) protein (76aa)
30S ribosomal protein S18 id=4365547 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
30S ribosomal protein S18 Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
30S ribosomal protein S18
bjp_ig2599_scaffold_3822_6
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


2408..2866
DNA (459bp) protein (153aa)
50S ribosomal protein L9 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A5D1_MELRP
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribac
bjp_ig2599_scaffold_3822_7
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3074..3499
DNA (426bp) protein (142aa)
preprotein translocase subunit SecD Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
Protein translocase subunit SecD id=4889807 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
preprotein translocase subunit SecD
bjp_ig2599_scaffold_3822_8
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3688..4902
DNA (1215bp) protein (405aa)
Protein translocase subunit SecD id=4889807 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
preprotein translocase subunit SecD Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
preprotein translocase subunit SecD
bjp_ig2599_scaffold_3822_9
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4921..6060
DNA (1140bp) protein (380aa)
Protein translocase subunit SecF id=4365580 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
preprotein translocase subunit SecF Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
preprotein translocase subunit SecF
bjp_ig2599_scaffold_3822_10
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6212..8005)
DNA (1794bp) protein (598aa)
thioredoxin Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
Thiol:disulfide interchange protein id=4536947 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
thioredoxin
bjp_ig2599_scaffold_3822_11
unknown

Not on your lists

comp(8021..8245)
DNA (225bp) protein (75aa)

This feature has no annotations

bjp_ig2599_scaffold_3822_12
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8249..9442)
DNA (1194bp) protein (398aa)
thiol-disulfide isomerase-like thioredoxin Tax=GWB2_Bacteroidetes_41_8_curated
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=4318792 bin=GWF2_Bacteroidetes_42_66 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
bjp_ig2599_scaffold_3822_13
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9466..12111)
DNA (2646bp) protein (882aa)
TonB-dependent receptor plug Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
TonB-dependent receptor plug id=4687224 bin=GWC2_Ignavibacteria_38_9 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
TonB-dependent receptor
bjp_ig2599_scaffold_3822_14
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12238..13251)
DNA (1014bp) protein (338aa)
anti-FecI sigma factor FecR Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
Fe2+-dicitrate sensor, membrane component id=4687225 bin=GWC2_Ignavibacteria_38_9 species=Opitutaceae bacterium TAV1 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
bjp_ig2599_scaffold_3822_15
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13599..14165)
DNA (567bp) protein (189aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Imtechella halotolerans K1 RepID=I0WBA7_9FLAO
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EID73673.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella
ECF subfamily RNA polymerase sigma-24 subunit
bjp_ig2599_scaffold_3822_16
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14404..16011)
DNA (1608bp) protein (536aa)
Serine phosphatase RsbU subunit sigma id=4365583 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Serine phosphatase RsbU subunit sigma Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Serine phosphatase RsbU subunit sigma
Displaying 16 items

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