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bjp_ig2599_scaffold_7207

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_7207_1
R_OD1_Nomurabacteria_33_24, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


3..1085
DNA (1083bp) protein (361aa)
DNA-binding/iron metalloprotein/AP endonuclease; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_33_24_curated
pmx:PERMA_0185 putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=3265 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
bjp_ig2599_scaffold_7207_2
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists


1219..3330
DNA (2112bp) protein (704aa)
valS; valine--tRNA ligase (EC:6.1.1.9)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000369942C rbh
Valine-tRNA ligase {ECO:0000313|EMBL:KKT20144.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
bjp_ig2599_scaffold_7207_3

Not on your lists

3315..4004
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWZ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR60169.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
hypothetical protein
bjp_ig2599_scaffold_7207_4
R_OD1_Giovannonibacteria_44_11, Giovannonibacteria, Parcubacteria, Bacteria

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4024..4461
DNA (438bp) protein (146aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_44_11_curated
Protein containing Heat shock protein Hsp20 domain id=5226976 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Small heat shock protein
bjp_ig2599_scaffold_7207_trna_4
unknown

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comp(4498..4570)
DNA (73bp)
transferRNA
bjp_ig2599_scaffold_7207_5
unknown

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comp(4829..5086)
DNA (258bp) protein (86aa)

This feature has no annotations

bjp_ig2599_scaffold_7207_6
unknown

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comp(5296..5478)
DNA (183bp) protein (61aa)

This feature has no annotations

bjp_ig2599_scaffold_7207_trna_3
unknown

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comp(5593..5666)
DNA (74bp)
transferRNA
bjp_ig2599_scaffold_7207_trna_2
unknown

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comp(5670..5741)
DNA (72bp)
transferRNA
bjp_ig2599_scaffold_7207_7
GWF2_OD1_40_10, Parcubacteria, Bacteria

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comp(5744..5980)
DNA (237bp) protein (79aa)
Glutaredoxin-related protein Tax=GWF2_OD1_40_10
Glutaredoxin-like protein, YruB-family id=2130206 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
glutaredoxin-like protein
bjp_ig2599_scaffold_7207_8
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

6066..7178
DNA (1113bp) protein (371aa)
(NiFe) hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF id=137980 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i rbh
(NiFe) hydrogenase maturation protein HypF
Tax=BJP_IG2158_OD1_28_51
bjp_ig2599_scaffold_7207_9
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

comp(7158..8141)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AAB0_9BACT
hydrogenase expression/formation protein HypE
Tax=BJP_IG2158_OD1_28_51
bjp_ig2599_scaffold_7207_10
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

comp(8134..9201)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2G8T5_9BACT
hydrogenase expression/formation protein HypD
Tax=BJP_IG2158_OD1_28_51
bjp_ig2599_scaffold_7207_11

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comp(9152..9430)
DNA (279bp) protein (93aa)
hypC; hydrogenase maturation factor; K04653 hydrogenase expression/formation protein HypC id=17311 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Hydrogenase maturation factor {ECO:0000313|EMBL:KKU54771.1}; TaxID=1618714 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE2_47_10.;"
HypC; hydrogenase maturation factor
bjp_ig2599_scaffold_7207_12
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(9399..10622)
DNA (1224bp) protein (408aa)
Coenzyme F420-reducing hydrogenase, alpha subunit n=1 Tax=uncultured bacterium RepID=K1XCV0_9BACT rbh
coenzyme F420-reducing hydrogenase subunit alpha Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
coenzyme F420-reducing hydrogenase subunit alpha
bjp_ig2599_scaffold_7207_13
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(10627..10968)
DNA (342bp) protein (114aa)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AT80_9CLOT
UDP-N-acetylmuramate--L-alanine ligase Tax=GWB1_OD1_43_8
UDP-N-acetylmuramate/alanine ligase
bjp_ig2599_scaffold_7207_14
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(11244..11585)
DNA (342bp) protein (114aa)
F420-non-reducing hydrogenase vhu subunit G (EC:1.12.99.-) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
NADH ubiquinone oxidoreductase, 20 kDa subunit id=2874722 bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
NADH ubiquinone oxidoreductase 20 kDa subunit
bjp_ig2599_scaffold_7207_15
RHI_OP11_Daviesbacteria_43_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11582..11941)
DNA (360bp) protein (120aa)
S23 ribosomal protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated
S23 ribosomal protein id=43756 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
S23 ribosomal protein
bjp_ig2599_scaffold_7207_16
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(12019..12369)
DNA (351bp) protein (117aa)
Marine sediment metagenome DNA, contig: S06H3_C01083 Tax=GWA2_Nitrospirae_42_11_curated
bjp_ig2599_scaffold_7207_17
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(12391..12897)
DNA (507bp) protein (169aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
Oxidoreductase FAD/NAD(P)-binding domain protein id=2357323 bin=GWD1_TM7_39_7 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein
bjp_ig2599_scaffold_7207_18
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13133..13999)
DNA (867bp) protein (289aa)
cno:NT01CX_1540 galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] id=131075 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
UTP-glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:KKP58436.1}; TaxID=1618715 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_34_10.;"
UTP--glucose-1-phosphate uridylyltransferase
bjp_ig2599_scaffold_7207_19
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(13989..14873)
DNA (885bp) protein (295aa)
Cytosolic NiFe-hydrogenase, beta subunit n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S3H2_DESTD
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
cytosolic NiFe-hydrogenase subunit beta
bjp_ig2599_scaffold_7207_trna_1
unknown

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comp(15081..15151)
DNA (71bp)
transferRNA
bjp_ig2599_scaffold_7207_20
CG_CPR03_02, CG_CPR03, Bacteria

Not on your lists

comp(15157..15543)
DNA (387bp) protein (129aa)
hypothetical protein Tax=CG_CPR03_02
hypothetical protein id=4968539 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
bjp_ig2599_scaffold_7207_21

Not on your lists

comp(15670..17484)
DNA (1815bp) protein (605aa)
Elongation factor 4 {ECO:0000313|EMBL:KKR47689.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
GTP-binding protein LepA id=4968540 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
GTP-binding protein LepA
bjp_ig2599_scaffold_7207_22

Not on your lists

comp(17694..18467)
DNA (774bp) protein (258aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MDT2_9PORP id=84286 bin=ACD56 species=Porphyromonas uenonis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKN93572.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
bjp_ig2599_scaffold_7207_23
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(18464..20122)
DNA (1659bp) protein (553aa)
Integral membrane protein MviN {ECO:0000313|EMBL:KKT18974.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
hypothetical protein; K03980 virulence factor id=5803542 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
integral membrane protein MviN
bjp_ig2599_scaffold_7207_24
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(20127..22433)
DNA (2307bp) protein (769aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT18973.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
Putative uncharacterized protein id=4968544 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Tetratricopeptide TPR_2
bjp_ig2599_scaffold_7207_25
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

22491..22691
DNA (201bp) protein (67aa)
MerR family transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Transcriptional regulator, MerR family id=2130250 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
MerR family transcriptional regulator
Displaying 29 items

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